EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS120-00539

Organism

Homo sapiens

Tissue/cell

LNCaP-abl

Coordinate

chr1:179899170-179901360

Target genes

Number: 5
Name	Ensembl ID

AL359853.2	ENSG00000258664
TOR1AIP2	ENSG00000169905
TOR1AIP1	ENSG00000143337
RP11	ENSG00000235145
QSOX1	ENSG00000116260

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Arntl	MA0603.1	chr1:179901280-179901290	GCACGTGACC	-	6.02
IRF1	MA0050.2	chr1:179900919-179900940	AAAAAAAAAAAGAAAGAAAAG	-	6.41
NR2F1	MA0017.2	chr1:179901281-179901294	CACGTGACCTTTG	-	6.3
NR2F1	MA0017.2	chr1:179899597-179899610	CCTTTGACCTTTG	-	7.22

GeneHancer

Number: 2
ID	Chromosome	Start	End

GH01I179929	chr1	179898684	179899831
GH01I179930	chr1	179900101	179900330

Enhancer Sequence

TTGTAATAGC TTAATATAAT GTAAAGCCCA GAATATTTTG CTTGATATAG CCTCTGAAAG 60
AGAATCACTT ATAGTCCATG ATCTGTCCAA CATTCAACAG GCATCTCAAA CTGTGTTGGA 120
GTAGTGTAAT ACTTGCTGCT TGAAATATAA GATCTGAGTG AGCAAATTCC AATGAAATCT 180
TTTCCTTTGG AAATAGTTCC AAAGAATTAA GCTTTCTATT GTTAACAGGC AAGTTCCAAA 240
GACCAAAGGT TTGCTCCTCT GAAATATTTT CATTAGCCTT GAATAAGCAA GTTGGCAGAG 300
AGAGGGAACG AAGTACTTTT GTGTTCAGAA AATGCAGCCA ACTTCCTATC TCTGGCTTTA 360
CCTCTAAGTT TTGTTATTGA ATCAGCAGTT CTGTTTTTTT AAGTCATCTG GTTATTCCCA 420
AGGTGGCCCT TTGACCTTTG CAGTTTGCCC AAAGGAGATC TACATGTATT AGCTGGTTGG 480
ACTATAGGTT AAGCTTAGAT TTAGCTCTAA GCAATGAACC CTTTGCCCTT ATATCACCTG 540
TTATCTCGTT CCTGCAGAAA AGGAACACAA ACATCCAAAT TTATAGCAGT CTCAACATCT 600
GCCTTAAAGC TTTTGTAAAG TATACAGGGA GTAATGTAAA TATGTGCATG CTAACATTAA 660
TGTGAAATAA ACTCTAAGTA AACAAGAGGA ATGAATGGAT AAGGCTAATA TAACTCTCAT 720
AGCTACAGCC ATCTCCCATA ATTGGAAAGT TAAGTGCTTT AAAAAATTTG TTTCAAATTT 780
TAAACATAAT AATTTAAACA AAAAAATTAA AGTTTTAGTT TCATGGTTTC TTCAAAGTAT 840
CAATTCTCCT CAAAACAATA AAAACAGCCA ATGAAATTAA AATACATAAA GAGTACCCGG 900
TAAATAGAAA CGAATAAAGT AAAAAAGTAA GTTGAACAGG AGAAGTTTGG AAGTAAGGTG 960
CTGGGATAAT CAACAAGCCT GGTAAGGTCC ATTTCTCAGA CAGTATGAGG TCATGCTGCA 1020
GATAGCAACA TATTTCTGGC GCCTTCCATC TGAGGTTCTT CAAGTGCATA GCTGATGTTA 1080
TCTTATAGCA AATATTATTA CCTCCATTTT ATAGGTGCAG AAACTAAGAT ACCAGGAGAT 1140
TAGATAACTT GCTTAAGCCT GCACAATGAG TCAGTGATAG AATCAGAAGT GTATTTCAGG 1200
AATCTAATCT TTTCTGTTTG AATCACTAGG TCAGCTTTCT AGATACCAAA AGACATGTAT 1260
GAATTTTTAT TAAAATTAAT AAATTGTAAA TTTTGTTAAT ATACTTAGAA AATGGATTAT 1320
CTTCTGTAAA CAATTCAGTG AAATATTTTT GTTGTAAGCC ATTGTTGCTT TTTGGGGGGA 1380
AAAATTTAAG AGGTGATTTA AAAATAAGTT CTCCCAGGTT TGAAAAGGTA TTCATGTGAG 1440
GTTTAAATTA TTTAGGAAAA CCCATTTTAA AGGTTGAGCA TGATGGTGAA CGCCTGTAAT 1500
CCCAGCACTT TGGGAGGCCG AGGCAGGCAG ATTGAGCTCA GGAGTTTGAG ACCAGCCTGG 1560
GCAACATAGT GAGACCCTGT CTCTACAAAA GGTTTAAAAG TTAGCCAGGT GTGGTGGTGT 1620
GCACCTGTAG TCTCAACTCC TCAAGAAGCT GAGGCAGGAG GATTGCTGGA GCCCAGTTCA 1680
AGGCTGCAGT AAGCTGTGAT TATGCCACTG CACTCCAGCC TAGGCGAAAG AGTGAGATTC 1740
TGTCTAAAAA AAAAAAAAAA GAAAGAAAAG AAATTTATTT TGGCAGAAGT ACAAGGATTG 1800
GCACATGTTG TTGTGGTCCT TGTAGACTTT CAATGACAGA TAAAGTAGTT CTATAATTAG 1860
GATAAAAATT AGAACAAGGG TAATAAAGAG TGAGTAATAT TTTGGAGTCT TATACAGGCA 1920
GGGGCCAGAC ACTTGGGCCA GCTGTCAGCT TCTCACGTTG CCTGCTTCTT ATTCCAAGAC 1980
TGAGCAGCAG AGTGGTTCCT GGTAAATTTT AATTTCAGAT AACCATCAGA TTGAGATGTC 2040
CGTTCAGGAG ACTTAGCCTT GAAAAACAAA TTTTTTTATA ACACCTGGAC CAGTTCCTTA 2100
CAGTAGGTGA GCACGTGACC TTTGATTAGA TTTGATTCAT AAAGTGCATG GGTCTTCCAG 2160
TAATTATCTC AAATGGGGAT AACCAATGTT 2190