EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS120-00534

Organism

Homo sapiens

Tissue/cell

LNCaP-abl

Coordinate

chr1:175160920-175161770

Target genes

Number: 4
Name	Ensembl ID

RP11	ENSG00000231378
RP1	ENSG00000237249
CACYBP	ENSG00000116161
KIAA0040	ENSG00000235750

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

IRF1

MA0050.2

chr1:175161053-175161074

CTTCAGTTTCCCTTTCGGTTA

6.34

dbSUPER

Number of super-enhancer constituents: 3
ID	Coordinate	Tissue/cell

SE_11175	chr1:175145121-175168020	CD20
SE_43334	chr1:175159316-175163728	Lung
SE_63134	chr1:175155170-175180197	Tonsil

Enhancer Sequence

GGAGCTTCCA AGATGCTCCA GTGGTCTTTT CCTTCCCTTC CTCGTATAAC GCAATCGGTG 60
GCACAATCCC GCTAAGTAGC ATGGCATGCT GGCTGCCGGT GTTCTGTTAA ATTAGGGTGA 120
GTGCTTGTCT GTGCTTCAGT TTCCCTTTCG GTTAGGCAGG ACTGGTCTTC CCACTAGCTA 180
TCATCTATAG TTTACTTAAC TCTATTATCA TATGATGAAT CCCGTAAAGC TCTTCAGAAT 240
GTTAGGGAAA CAGGTCCTAT TATGTCCCCC ACTCTACCTT CATGGGTGGG ATGGGGGGTC 300
TGGGGGTGGG ACCACTGAGA GTCAAAGAAG TTAGGAAGTA ATCTGTGTCA CAGCAAGCTC 360
CCTGGAAACT CTCAGAATAG CAAACAGGTT TCCTCTCCGC CCCTGGCTCC ACGCCATATT 420
TTCGTTTTGG CTAGTTCCTT AGCTCCAGAG AAAATCTGGC TTCACCTAGA ATGGTTTAGA 480
AACACCTAAG CCCGCGATGC TTTCCGGAGG GTCTCAGGCC TTAGCTTTCT CAGTAAAAAA 540
CAGAATTTCC ATGTGTCCCC TTCAAAGCGC TCCTACCGGC AGCTGGAGTA AGGTAACTCC 600
ACCGCCGACC TCCGAGGAGT TCATGTGGAC TCAGCCCAGG CGCAGAGAGG AAGACTCCTG 660
AGAGTCCTCG CGAAGGAGGG AAACACACCA GAACTAAAGT TGTGAAGGCG CAAGAGGCTA 720
CTTAGGAATA ATTCCTTGTA TCTCTGGGGC AGGTCTCATC CTTCTAAAGA CAGGAGTGAC 780
TGGGCGTCTT CTTCCAAACA GAGGGCGCTT AAAAATGTAT TTTTAAAAAA CATAACAGAA 840
AGTCCTGAAA 850