EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS120-00358

Organism

Homo sapiens

Tissue/cell

LNCaP-abl

Coordinate

chr1:109968180-109968920

Target genes

Number: 22
Name	Ensembl ID

GPSM2	ENSG00000121957
CLCC1	ENSG00000121940
RP5	ENSG00000237349
RP11	ENSG00000244716
WDR47	ENSG00000085433
RANP5	ENSG00000228054
TAF13	ENSG00000197780
TMEM167B	ENSG00000215717
KIAA1324	ENSG00000116299
SORT1	ENSG00000134243
PSMA5	ENSG00000143106
SYPL2	ENSG00000143028
ATXN7L2	ENSG00000162650
CYB561D1	ENSG00000174151
AMIGO1	ENSG00000181754
GPR61	ENSG00000156097
GNAI3	ENSG00000065135
MIR197	ENSG00000207709
GNAT2	ENSG00000134183
AMPD2	ENSG00000116337
GSTM4	ENSG00000168765
GSTM3	ENSG00000134202

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

FOSL2	MA0478.1	chr1:109968717-109968728	GGGTGACTCAG	+	6.02
IRF1	MA0050.2	chr1:109968238-109968259	AAACAGAAACTGAAAGTAAAA	-	9.95
JUNB	MA0490.1	chr1:109968717-109968728	GGGTGACTCAG	+	6.02

Enhancer Sequence

AAATGTCTGC CTTCCCTGAC TTTAAAAAAG AGTAGCTATG TAAAAACTTA ACTGACGAAA 60
ACAGAAACTG AAAGTAAAAA TGTCTACAGC ATATATATGT ACAACTTAAT ATTGTGAACA 120
TTTTCATACC ACAAAAGTTT TTTAAAACTT GCTTTAAACT TTTAAAAAGT CAGAAAAAAT 180
TTTGGTCAAT TGGAATCGGC ATGATGAGAA ATCTCTTGAA AACCATTCTA AATTCCAGTT 240
CCTATAAAAT CAGACTCCAG ACAATATATC CAGCCAAAGC TACGACTGCC TTCGCGCTTC 300
TGAAGAAACT ATACACCGCA GCATGCCCTA CTACAAACCA GTTGCTTTTT CTTCCAGGAA 360
GCACGTTTAA CTTTTTGTTT GTTTGTTCAA GGCAGTCATA CTAGGCACGA AAAGATGAAC 420
GGAGCAAAGA GTGACCCTTG GCCTTCTCCG GGTTCAAGGT AGGAGTTCCG GCTCCTCACG 480
CCTTCTTTAC CAAGCACCAG CCGGAGCTTC TCGCTTCCGC ACCGAGTTAG GACCCAGGGG 540
TGACTCAGCG GTAGGACAAG TGCCGCCGAT GTGGTCTAGC TTGGGGAAGG ACGGCGGGCG 600
CCTGAGGAGG GCATAACATC CCCAGGTCCG GCCAGTCTCG GGTTCCTGGG GAGCCCCATG 660
ACACGGCAGA ACCCAGGCCG CGCGGCCAGG TCCCGGGCCT GCCCACCCAT AATTCCCACC 720
CGACGTCCCC CAGCTGCACG 740