EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS120-00304

Organism

Homo sapiens

Tissue/cell

LNCaP-abl

Coordinate

chr1:78443130-78444560

Target genes

Number: 9
Name	Ensembl ID

RN5S20	ENSG00000251785
ZZZ3	ENSG00000036549
USP33	ENSG00000077254
RP4	ENSG00000232672
FAM73A	ENSG00000180488
RN5S21	ENSG00000222849
FUBP1	ENSG00000162613
DNAJB4	ENSG00000162616
GIPC2	ENSG00000137960

dbSUPER

Number of super-enhancer constituents: 9
ID	Coordinate	Tissue/cell

SE_13760	chr1:78442270-78446554	CD34_Primary_RO01536
SE_14888	chr1:78440854-78446748	CD4_Memory_Primary_7pool
SE_18555	chr1:78439946-78447087	CD4p_CD25-_Il17-_PMAstim_Th
SE_19704	chr1:78440503-78446337	CD4p_CD25-_Il17p_PMAstim_Th17
SE_21141	chr1:78441202-78446868	CD8_Memory_7pool
SE_21684	chr1:78442308-78446105	CD8_Naive_7pool
SE_22645	chr1:78440827-78446362	CD8_primiary
SE_35273	chr1:78442114-78446661	HeLa
SE_36446	chr1:78442383-78446764	HMEC

Enhancer Sequence

AGCCGGGAGG CAGAGGTTGC AGTGGGACGA GATCGCACCA CTGCACTCCA GTCTGGGCGA 60
CAGAGGGAGA CTCCGTCTCA AACAAAACAA AACAAAACTC CAGTATCTAC CTACAGTGTG 120
CGATACCAAT TAATCCAATG TGCTGGTTCT GGTAAAATAA AATAGTTGGT TCCAGTAAAT 180
AAAATAGTTC CCTTAAGTTT TACAAATCAA TCTAATAAAA CACGCTAAGA GTGTTTGTCA 240
TAGTTATATG CTTGTTGCTA AACATGTTCA GAATTTCTTA AATTACGTGG AAAAAACCGC 300
AGAACTAATA TTAATGATGA CCTTTTGTTG ACTACTCCTA GTATTTCTGG TTATAAAAAA 360
GTACAGGTAC ATGTTTATAA TGCGTTCACA TTAGATGTGT TACAACGGAT TTTATGAATT 420
CTAATTTTGA CTCAATGTTC CTTCAACTGT CCCGGTAAAA AGTTAACTAA GTGAACTCCT 480
AATGCAACGA AAACACAGCA CAACACTGGT TTCTAATTAT CATTAGCTTA AAACTAGTAA 540
AAAATGCCCA GCACCTAGTA CAATATGCAT AGTGTCACAG AGAATAGGAT TCTTTTGCTT 600
ACATGCAAAT CTATACCAAC ACCATACATT TTGAAATGTT AAATATATTA GGGGACTATC 660
TAAGAATGTA AAGTTCAAAT TAAGGTATCT TTTATTTTCC TGGAATACAC GCACTATTTT 720
AACAGCTTTC GTCTGGGAAA GTGGTGCCTT CAGGGCAAAT GCACGCACTA CGTAATACAA 780
AGAGGTCTGG TCAGTTTACG ACTCTGAACT GAGAGGCAGA TTCAAATTGA AACCTCTGGT 840
ATAATGGGCC TGAGGCCATT TTGAGAAATA AGGGGGGCGG ACTGGTGGAA CAGACTGACA 900
CGTAAATCCC GCCCAGAAAA AGGCTGCTTT CAAGTCCCTT CCTTGTAGAG GTGTGACGGT 960
GAATGGTACT GAAAGCGGTT TTAATTGCGA GAGAGAACGG AAATGAGCTG TAAAGGCTAC 1020
TTTAATGATA AATCCCTTCC CTTGCTATGG CTCCAGGACA GACCCTAGTT CTTTCCCAAA 1080
CTCATTACCA GAACCTTCCA TTAAATTGTG TGAAACTAAC TGCGCTTTAT CCCCTGGAAG 1140
AGGATCTTTA TCTAAACTAG CTCACTGGAG ACACGCGAGT GCCGCAGAAG CGGGAGAAAG 1200
ACTTCAGGCC TTCTTTGCGT AGCACGCGTC GGGGTTCTAA GTGGATTAGG CACCAAGAAC 1260
ACAAAACTGG GTTCTGGTCT CTAATCGTTA TTACCAACAT GGGGAAACGT GTCTCTTCAC 1320
ATTTCAGCCC GGAAGAACAC CTCTTTCCTC TTCCTCATGC GCTTAAGGGT AGCGGCCTAC 1380
TCAGTCAGCG GCCAATTACC GTGAGCTTTC GGGATTCCGC CGCGCGGTCC 1430