| Tag | Content |
|---|
EnhancerAtlas ID | HS120-00118 |
Organism | Homo sapiens |
Tissue/cell | LNCaP-abl |
Coordinate | chr1:27470610-27471410 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| GATA2 | MA0036.3 | chr1:27471198-27471209 | ACAGATAAGAA | - | 6.14 | | Gata1 | MA0035.3 | chr1:27471198-27471209 | ACAGATAAGAA | - | 6.62 | | PHOX2A | MA0713.1 | chr1:27470758-27470769 | TAATTCAATTA | + | 6.14 | | Phox2b | MA0681.1 | chr1:27470758-27470769 | TAATTCAATTA | + | 6.14 |
|
| | Number of super-enhancer constituents: 9 | ID | Coordinate | Tissue/cell |
| SE_08182 | chr1:27471176-27473314 | Brain_Inferior_Temporal_Lobe | | SE_23485 | chr1:27470489-27471234 | Colon_Crypt_1 | | SE_24258 | chr1:27470808-27471060 | Colon_Crypt_2 | | SE_26354 | chr1:27471138-27473421 | Duodenum_Smooth_Muscle | | SE_31553 | chr1:27470590-27473494 | Gastric | | SE_37352 | chr1:27469560-27473471 | HSMMtube | | SE_42029 | chr1:27470581-27471295 | LNCaP | | SE_50517 | chr1:27470565-27473097 | Sigmoid_Colon | | SE_52500 | chr1:27467946-27473366 | Small_Intestine |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I027140 | chr1 | 27466743 | 27473516 |
|
Enhancer Sequence | TTAAAGCAAA GAGAAGCCAT AAGTAAATCT GTCCAGGTAC AACTATAAAT TAACAAGATT 60
GCCTTCTTGT ATGGTTTAAA GCCACTGGTC TCATTAATTC ACAGTCACAG TGCAGTTTAC 120
GGCTTGAGGA ATCTTCCCAG GAAAAGCTTA ATTCAATTAG GGCTCTCGGC AGCTCCCCAA 180
GGAAGCTCTG GTATCTTACT TTTACTTACA CAAATTGAGG GCAGACCAAA CAGATCCAGA 240
TCTTCCCAGA GAGACCCCAC CCGGCCCAGA GAAGATGCCC TTGCAGACCC TCCATTAGAG 300
CCAAGCCGAG GGAGGTGGCC AAGGCAGCAC CACTTAAACA CTGGCTGGCG CCTAAGGCAT 360
CATTCTGTGA GTGTCGCTCC CAGCGAGCTC AGTTAAACTC CTTGGCTTGG CAGTCTGGTG 420
CCAAGGAGCC TCTGCAACCT TTGCTCTCCC TCCTCTCTGA GCAGTCAAAC TGGTTTCTTG 480
TCTGCCCCAG GGCTTTGCAG GGATCCTATC TTTACACTGA AGTCAATCAC ATATTCATTC 540
ATGTATTCCT TCCCCAAATA TTTATGGAGC CTTTACTCTG TGCCAGGCAC AGATAAGAAA 600
GTGAACAGGC CAGGCGTGGT GGCTCACGCC TTTAATCTCC GCACTTTGGG AGGCCAAGGT 660
GGGTGGATCA CCTGAGGTCA GGAGTTCTAG ACCAGACTGG CCAGCATAGC AAAACCCCGT 720
CTCTACTAAA AACACAAAAA ATTAGCTGGG CGTGGTGATG TAAGCCTGTA ATCCCAGCTA 780
CTCTGGAGGC TGAGGCAGGA 800
|
