EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS120-00040

Organism

Homo sapiens

Tissue/cell

LNCaP-abl

Coordinate

chr1:8086050-8086210

Target genes

Number: 5
Name	Ensembl ID

VAMP3	ENSG00000049245
TNFRSF9	ENSG00000049249
PARK7	ENSG00000116288
ERRFI1	ENSG00000116285
RP11	ENSG00000238290

dbSUPER

Number of super-enhancer constituents: 18
ID	Coordinate	Tissue/cell

SE_01874	chr1:8085436-8088659	Aorta
SE_26425	chr1:8082149-8086213	Duodenum_Smooth_Muscle
SE_34231	chr1:8081590-8089572	HCT-116
SE_34846	chr1:8084635-8089008	HeLa
SE_36407	chr1:8076892-8087425	HMEC
SE_36931	chr1:8081701-8089203	HSMMtube
SE_43122	chr1:8085183-8088662	Lung
SE_45526	chr1:8085058-8086348	NHLF
SE_45858	chr1:8080914-8089736	Osteoblasts
SE_47909	chr1:8085442-8088288	Pancreas
SE_51696	chr1:8084957-8086171	Skeletal_Muscle_Myoblast
SE_52775	chr1:8084969-8088733	Small_Intestine
SE_54897	chr1:8081271-8089554	Stomach_Smooth_Muscle
SE_55872	chr1:8083604-8089851	u87
SE_57459	chr1:8085410-8086385	VACO_503
SE_63484	chr1:8084898-8088893	HSMM
SE_64486	chr1:8077922-8086202	NHEK
SE_67534	chr1:8083604-8089851	u87

Enhancer Sequence

TCCCTCCATC CCAGAGACTC CGCGTCGCGG CGACCCTCCC CGCGCCCTCC ACGCCCCCGC 60
CCTCGCGTCG GGGAGCCGCC TGGATCCCGG CGCCCGGCGC GGGGCCCCCT GAGGGAACGG 120
AGCGCTGCGT GGCCCTCCCC ACCCCCTCAG CGCGCCAGGC 160