EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS118-00952

Organism

Homo sapiens

Tissue/cell

Liver

Coordinate

chr1:109721870-109724170

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

HNF1A	MA0046.2	chr1:109724095-109724110	GGTTAATCATTTATT	-	6.9
HNF1B	MA0153.2	chr1:109724096-109724109	GTTAATCATTTAT	+	6.27
KLF13	MA0657.1	chr1:109723210-109723228	TAGAAAGGGGCCTGGCAT	-	6.25

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

SE_31987	chr1:109721980-109722361	Gastric
SE_31987	chr1:109722437-109724802	Gastric

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I109179

chr1

109722096

109725214

Enhancer Sequence

AAAATTGGCC GGGCATGGTG GCGGGCGCCT TTAGTCCCAG CTACTCGGGA GGCTGAGGCA 60
GGAGAATTGC TTGAACCCGG GAGGCGGAGG TTGCAGGTTG CAGTGAGCCG AGATCATGCC 120
ACTGCACTCC AGCCTGGGTG ACAGAGTGAG ACTCTGTCTC CAAAAAAAAA AAAAAAAAAA 180
AGAAGTGTGA GCAAAGGCCA GAAAGCTCAG GAAACTGCAA ATAATTCAGC TTGGCTGGAG 240
ATTAGGTGGC GAGAAGTTGC ATCTAAGGCT GAGAAGCAGG CCGGAAACAG ATTATGGAGC 300
AGTCCTTCTG TGCTATTGTA GGGGCAAAAA ATTGGGATTT GATCCTATCA GCAGTGGAGG 360
TCATTAAAGA ATTTTAAGAG GCCAGGCACG GCCATGCCTG TAATCCCAGC ACTTTGGGAG 420
GCTGAGGCAG GTGGATCACC TGAGGTCAGG AGTTGGAGAC CAGCCTGACC AACCTGGTGA 480
AACCCCGTCT CTACTAGAAA TACAAAAATT AGCTGGGTGT GGTGGCACAC GCCTGTAATC 540
CCAGCAACTT GGGAGGCTGA GGCAAGAGAA TTGCTTGAAC CTAGGAGGCA GAGGTTGCAG 600
TGAGCCGAGA TCACACCATT GCACTCTAGC CTGGGTGACA AGAGGGAAAC TCCATCTCAA 660
AAAAAAAGAA TTTTAAATGA AGGATTTCAG CCAGTGCTTT TGAAAGACCA CTCTGGCTGC 720
CATGCAGAGG AGGGAGGGAA TGCTGGAGGC AGAGGCTGTG GTAGGGAGAT GTTGCAGCTG 780
GCATCATTGC TGATGTCCAG GACCTAAACT AAGGTGGAAT TAATGTGGGT GGAGATTGGA 840
GAACTCACAG GAGCATTGTG AAGGACAAAA GCCTGACTAA AAGCATCTTT CTCACTGGTC 900
CCTAAAATTT GATCATTAGG TTTAATTTCT TTGTGTTATG TTTCATATTA GTGATCCATT 960
TCCTAAACAG AATAGCATGA AGTTAAAGAG CATGGACTCC AGAACTAAAT TACTAGGGCT 1020
CAAATCCCTG CTCCACCAAT TAGTAGCAGT GCCACCTTGG GCAAATTACT TATCTGTGCC 1080
TCCGTTTCTT TGTCTATAAA ATGGGAAGGA CAGCTGGGCA CAGTGGCTAT TGCTTGTAGT 1140
CTCAGCTACT GGGGAGGCTG ACGCAGGAGG ATCGTTCAAG CCCAGGAGTT AGAAGCTGAG 1200
TGAGCCATGA TTGCTCCATT GCACTCCGGC CTGGGCATCA GAACAGGACC CCATCTCTTT 1260
AAAAAAAAAA ATGGGAATGA CAATAATTAT ATCTGCCTCA TAGTGTTATT GTGAGGATTG 1320
GTTAATACAG GTAAAGGATT TAGAAAGGGG CCTGGCATAT AGTAAGCAGT AATTTTATTA 1380
ATTCATTTAC CTTAAGCCCT GTCCCAACAC TCCTTTTTTA ATATGAAAAT ACTCAGGCCA 1440
GCACTATGGC TCACACCTGT AATCCTAATA CTTTGGGAGG CCGAGGCAGG AGGAGTGCTT 1500
GAGGCCGGGA GTTTGAGACC AGTCTGGGTA ATAGAACAAG ACTCCTGTCT CTACAAAAAT 1560
AAAAAAATTA GCCAGGTGTG GTGGCATGCA CCTGTAGTCC CAGCTACTCA GAAGGCTGAG 1620
GTGGGAGGAT CACCTGAGCC TGGGAGGTAG AGGCTGTACT GAGCTGATTG TGCCACTGAA 1680
CTCCAGCCTG GGTGACAGAG TGAGGCCCTG TCTCTAAAAA AAAGAAAAGA AAAGAAAATA 1740
CTCCTGGTAC AGGTAACACT CATAAGTCAC GTGTATAGTA CTCTCCAATT GACAAAACAT 1800
GATCTCATTT ATTACCTATA GCATAGTGAG GGAGTTATTT CTGCATTTAC CGAGGAAGAA 1860
AGAGAAGCTC AGCGACACTG AGGAGCTTCA CAAAAGCATG AGCTGCTGTC TGACCCGGGC 1920
CTGTGTCCAT TCAGTACTGA AACCCTCAGG AGAAATGTTT TACTTTGATA AAACAGATCC 1980
CAGTGAGAAC ATTGTACTCC TGGAGGTGGG GGGATATTGA AAGGAGGAGG CAGGTGCAGA 2040
AAGAGGAGTT GGAGCCCCTG AGATAAACTT TATCTTCTTA CAGTTTTGCC CAGGGCCAAT 2100
CCTACTTAAG TCACTTTTCA CTCCCTCAAC CAAACACAGA GGCCCATCTT CCAAACTTGA 2160
CTAGCATCCA ACTTAAACAC TTTGATGAAA CCCAAGCTGG GAAAGGAGGT TGGTCTCAGC 2220
ATTTTGGTTA ATCATTTATT AAAACCACCT TAACAGGGAT CAGTGTGTAA ACAGCTGAGC 2280
CATTTTTGCT AAAACCCAGA 2300