| Tag | Content |
|---|
EnhancerAtlas ID | HS117-00699 |
Organism | Homo sapiens |
Tissue/cell | LHCN-M2 |
Coordinate | chr1:223959940-223960700 |
Target genes | | Number: 11 | Name | Ensembl ID |
|
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| ZNF143 | MA0088.2 | chr1:223960085-223960101 | ATCCCACAATGCACTT | + | 6.39 | | Zfx | MA0146.2 | chr1:223960057-223960071 | CGGGGCCAGGCCTG | + | 6.24 |
|
| | Number of super-enhancer constituents: 11 | ID | Coordinate | Tissue/cell |
| SE_03438 | chr1:223958774-223960204 | Brain_Angular_Gyrus | | SE_04026 | chr1:223957700-223961124 | Brain_Anterior_Caudate | | SE_05036 | chr1:223957080-223961150 | Brain_Cingulate_Gyrus | | SE_05972 | chr1:223957840-223961220 | Brain_Hippocampus_Middle | | SE_07159 | chr1:223958193-223961165 | Brain_Hippocampus_Middle_150 | | SE_07996 | chr1:223958259-223961152 | Brain_Inferior_Temporal_Lobe | | SE_15098 | chr1:223957468-223961297 | CD4_Memory_Primary_7pool | | SE_21386 | chr1:223957565-223961200 | CD8_Memory_7pool | | SE_37727 | chr1:223957885-223961236 | HSMMtube | | SE_40000 | chr1:223957792-223961100 | K562 | | SE_42269 | chr1:223958286-223961055 | Lung |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I223769 | chr1 | 223957177 | 223961167 |
|
Enhancer Sequence | TGTGAGTCAG CAGGCCCCGC CTTGCTTCTA AGGGGATGGG GGAGGCATGG GGCGGAAAGG 60
GCTGTTACTT GAGTGATCTG CTTTTTCAAG TTTTGCTTTA AAGAGCTCTT GGTCTGTCGG 120
GGCCAGGCCT GTAACCGGTT GTAAGATCCC ACAATGCACT TTTACTTGCA GTTGTTTTCC 180
AACCACCTAT TCTCAAGTCC AAAATGCACG CCTGGCTCCC TCTTCTCATG AGCTTTGACT 240
TGAGTGTAGC TCAAGGTTAA ACTAAGGAGT GGCTGCAGGA TCATGCTTAG AAAAATGAAC 300
TCCTGATTAG CATGCAAGGG AGAACATGTT TATATAAAGA AATCCTTCAG CTGAAATTCA 360
AGTTGGGTTT TGGGAAGATC CATCATTCTT AGAGTGGATC TACTTAAAAT ACTTTAAGCA 420
AATTAGTTTT CTCTACTCCC TCCCCGTTTA AGATAAAACC AATACTAGTA AATACGTTTG 480
CCATTTATTA TTGTTATTGC ACTCATGTGT CTGGAACCCT AGCAATACAC ATCTCTGAAA 540
TGATCATCAA TCTGAATTAA GTGGGTATGC TAATTTCACA AAAAGCAAAG CGTAAAATGT 600
TCTCGTGTCA TCCCAATGAC AGGAAGTTCT CTCACTGAAA GAAAGAAGCC AGGTGGGGTA 660
TACTTCCATT ATCACCTGGC TCCAGTCAGC ATTTCCTCTA TACTCAGGGA AGGCCACAGA 720
GGGCCGGGCG AAGTGGCTGA CACTGGGTGA GAATGGCAGT 760
|
