EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS117-00606

Organism

Homo sapiens

Tissue/cell

LHCN-M2

Coordinate

chr1:201365090-201365540

Target genes

Number: 10
Name	Ensembl ID

TNNT2	ENSG00000118194
LAD1	ENSG00000159166
TNNI1	ENSG00000159173
PHLDA3	ENSG00000174307
NAV1	ENSG00000134369
RP11	ENSG00000236390
IPO9	ENSG00000198700
SHISA4	ENSG00000198892
TIMM17A	ENSG00000134375
RNPEP	ENSG00000176393

dbSUPER

Number of super-enhancer constituents: 9
ID	Coordinate	Tissue/cell

SE_23613	chr1:201364814-201370403	Colon_Crypt_1
SE_24358	chr1:201364954-201365516	Colon_Crypt_2
SE_27109	chr1:201363153-201370321	Esophagus
SE_27902	chr1:201364709-201371603	Fetal_Intestine
SE_28851	chr1:201363614-201371508	Fetal_Intestine_Large
SE_30745	chr1:201364644-201366487	Fetal_Muscle
SE_37337	chr1:201362989-201368003	HSMMtube
SE_47986	chr1:201364926-201365554	Pancreas
SE_52919	chr1:201364858-201370479	Small_Intestine

Enhancer Sequence

GGAGGGAACA GAGGCCCAAG AGGGCATCTG AAGGTGTGGT ATTCCCTACC CCAGGACAGG 60
CTGGGGCCCA GGGCAAAGCC TGGGAGCCTG GGAGGGCAGA GGTTTGGGGA AACCCCGTGG 120
CCCATGCAAC ATTGACCTTC AAGCCCCAGA GCCAGGCCCA GGGTGAAACC TACAGGCCCG 180
AACAGCTGCG GAGGCTCAGC TGCTCCTACT AGCTGAGGCC ACAGCCCCAG GCAGCTGCCT 240
ACCACTCCTT CCCTCTAGAC AACCCTTTCC CCCACCTCCT GGCCTTCATC TGGGGACACA 300
TGTCCCTCTC GGTGTCTCCA TGTAATGCTG CTATCCTCCT CCCCACTCCA GACTTCAACT 360
CCATCCTTTG GGGATGGGGA TCCTCTTTTT CTCTTAAATA ATTCTAAAGG ACATTCTGCC 420
GTTACTCACT AGAGAGCTTG TTTTGACCTC 450