Tag | Content |
---|
EnhancerAtlas ID | HS117-00418 |
Organism | Homo sapiens |
Tissue/cell | LHCN-M2 |
Coordinate | chr1:120556960-120559420 |
Target genes | |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
MAFK | MA0496.2 | chr1:120558607-120558626 | TATAGCTTACTCAGCAAGA | + | 6.04 | MAFK | MA0496.2 | chr1:120558607-120558626 | TATAGCTTACTCAGCAAGA | - | 6.31 | Myod1 | MA0499.1 | chr1:120557817-120557830 | TGCAGCTGCTCCT | + | 6.15 |
|
| Number of super-enhancer constituents: 27 | ID | Coordinate | Tissue/cell |
SE_00001 | chr1:120545720-120570355 | Adipose_Nuclei | SE_00811 | chr1:120556988-120557599 | Adipose_Tissue | SE_00811 | chr1:120557727-120558457 | Adipose_Tissue | SE_00811 | chr1:120558802-120559057 | Adipose_Tissue | SE_03065 | chr1:120555710-120557739 | Bladder | SE_03065 | chr1:120557761-120559627 | Bladder | SE_03434 | chr1:120554599-120564678 | Brain_Angular_Gyrus | SE_03980 | chr1:120549079-120570221 | Brain_Anterior_Caudate | SE_07385 | chr1:120548934-120569847 | Brain_Hippocampus_Middle_150 | SE_08816 | chr1:120556940-120559534 | Brain_Mid_Frontal_Lobe | SE_09137 | chr1:120545789-120570232 | CD14 | SE_12867 | chr1:120554695-120560603 | CD34_Primary_RO01480 | SE_13322 | chr1:120545914-120570095 | CD34_Primary_RO01536 | SE_14057 | chr1:120546042-120569730 | CD34_Primary_RO01549 | SE_18945 | chr1:120550673-120570213 | CD4p_CD25-_Il17-_PMAstim_Th | SE_26595 | chr1:120555685-120560732 | Esophagus | SE_29608 | chr1:120554644-120561087 | Fetal_Muscle | SE_36951 | chr1:120555708-120560186 | HSMMtube | SE_41312 | chr1:120555136-120563468 | Left_Ventricle | SE_42341 | chr1:120556611-120563456 | Lung | SE_43397 | chr1:120554561-120565886 | MCF-7 | SE_45586 | chr1:120545832-120570231 | Osteoblasts | SE_46953 | chr1:120556751-120557698 | Ovary | SE_46953 | chr1:120557769-120558574 | Ovary | SE_46953 | chr1:120558653-120559658 | Ovary | SE_49875 | chr1:120554642-120565868 | RPMI-8402 | SE_53396 | chr1:120556680-120563463 | Spleen |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH01I120014 | chr1 | 120556661 | 120559639 |
|
Enhancer Sequence | GCAGATTGCT AGAGCAGAAG TTCGAGACCT GCCTAGACAA CACGGGCAAC ATGGTGAGAA 60 CCCCATCTCA AAAAAAAAAA AGTGTCATTT CTGACATTGA GAGGTCCACA TTTCCATTGT 120 TACTGTTCAA ACATACGCAT GGGGTTGGAT GTAGAAAAGC AAAGGAAGGA AGAAAACAGA 180 GAAAAACAAG GGATTCCTCC TAATGGAACT AGAAAACATT CCATTTGAAG GATACCCCTA 240 CAGTTTCCTC TCACTTAAGC AGATGAAAAC CAGACCCCAA CCCTCACATC TCACTAGCAG 300 CCTGGATTAG TTTACATGTA GCCACTTTAC AGATTTCAAC GAAGCTGGGA TCTGAATAGC 360 AATTCCAATC TATCTGGCAA TGGCTGCAGT TCAGGATCAG TCTCCCTAGT AATACAGGAC 420 AGAAAAATTT GTTCTTTCAC GTTTCCTAAG TGAATAGCCA CTCGTCTACA GAAAAGCTTA 480 AAACAGTGTA GCAGCTTGTG TCAGCTCCAA GATGACTGAA GTCTGAGCAG GAAATAAGCC 540 CCTTTTCCAA ATAAAAGCCA GTGTTCTCTC CCCTTGTTTT CTCCACCGAA TGTTCTGTAT 600 CAGCAGGGTG AGGCCAAATT GCATCCAGGG CTTTGCTGCA GCTCTGTCTT TAGCTTTTTT 660 TTTTTTTTTT TTAAAAACGA GGATTTGGCC ATTCAAAAAA AAACAACAAC AACAACAAAG 720 CAAAATCCCA CCACATACAA GAAGAAAAAG AGAGGCATGC TTTACAAAAC AGCTATTTCA 780 AAATCATGAT TTTTAAAAAA ACTATACAGA ATGTGGAACG AAGGGGAAAA AAAGTCTCAT 840 GTGGGTTGCG TCGGCACTGC AGCTGCTCCT CATTAAAGCT CCTCTTTACT CCCTCTGGGC 900 TAGTTTCCAG CAGAAAATTC TTTGAACAGA ACTCTGCTTT CAACCCACTT TCTTCTTGCG 960 CTGGGCCTCT TGGCCCCCCA ATCCGCAGTG GCAGCCTGCC CTAGCTGAGC TCTAGAGGGG 1020 GGAGCTGTCG TTAAGGTAAA TGAGGTAAGG GCAGGGGAAA AAACTAACAA AACCCAGAAA 1080 CCAAATTAAG CATCGGTCAG TAACAAAGGT CTGCAGTTTG AAAGGCTCCA AATCAGTCTG 1140 TTCTTTCCTG TGACCATAAT GCCAGCTTAG TTTCCTGCCC CCCTACTCTG TCCCCCCTGT 1200 TAAAGTAGAT AAAAATAATT GCTAACAGCC AAGGCTAGCT GGAACCAGTG AAAGTTCCTA 1260 TGTAACATTC AATTCCCAAG GCTCCGACTA CAAACTTGTA GGTACCCCAG AGCCTATAGA 1320 ATCAAGTCTA AACTTCTAGG CTGGCATTCA GGAGGCCTAA CCCACCTATT GGTCTAAACT 1380 CACTGGTCTC CCTCCTTTCA GTACCTCCTG GCTGAGGTCT GATGGGCTTG TCAACTTTTT 1440 AATTCTGTCA CTCTGTGTAA AGGTAACTAA CTAGGTTATG CTAATTACCA ACTTTGTTTT 1500 AAAAACATGC ATGAGGACTT CTAGTTAACT TCCTGGTAAA GAGGGGAAAA AAAGAGAAGA 1560 AGCTCTGTCA TACTACTTCT TGCCATTCCC ACTCTACTCT CAACCCCCCC TTCTCTCAAA 1620 AAAAAAAGAA AGAAAAAAAG GAAATACTAT AGCTTACTCA GCAAGAAGGA AAAACAAAAA 1680 GAACTTTAAA AAAAAGTATT TGTGTATAGA TTGGTGTCCA GAACTGGGAC GCTTGTGGTA 1740 AAACACACTT TCTAGTGTAG TTTTTCTAGG GCCTTACTAG TTGTATGTGA AGGAAACAAA 1800 GACAAGTATA CAATCTCTCA CTCTCACACA CGTACACACA CACATACACA CTTTTATCAC 1860 AACTAATACA CAAAGACTAC CAAATACTGC AGGGCAGCTC ATTTTTCTAC TATGTAAATT 1920 CAGCTTCCTG GACAGACCAT TTCTGCTTTT CTTGTAGAAG TATTTCAGAA AATGTTAATC 1980 TTGGTTCCCA CATTAGGTTG CATGCTTCCA AATTAAAAGT TTCCCACAGG AAAAGAACTT 2040 CACGAGGAAT TGTGAGGCTG GGAATTATCT CTGAAACCCC ACCTCACTTA GTTTACATGT 2100 GTTAGGTTTT TCACCCCCTC ATCTGAATAA AGCATTAAAT ACACACTGAT TTTAAGAAAC 2160 CTAAACCAAA AAGAAGCTGA AGTGATACGG ACTTTAAAGC TGTTGATTCA CAGCATCATT 2220 CATCTTCACT CAGACTATGA AATCAGTAAC CACTGCAATG AGAAACCATG CTTTATTTAT 2280 ACAAGAACTT TACAAACATC CTTATCTTCC AGTTTACAGT CTGGGCTCAT TTATCAGAAC 2340 TCAAAGGCTG AGCTGAGCAC CTAGTCTCTT CAATCATCAC TTGAAAGATT GGGAAGGGGC 2400 ACACAGTGTT AAAAGACTTG TGTTGTTGCT ATAACAGAAG GTGGTCTTTC CTCTGTGTTC 2460
|