EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS117-00316

Organism

Homo sapiens

Tissue/cell

LHCN-M2

Coordinate

chr1:78443100-78444560

Target genes

Number: 8
Name	Ensembl ID

NSRP1P1	ENSG00000235613
NEXN	ENSG00000162614
FUBP1	ENSG00000162613
DNAJB4	ENSG00000162616
GIPC2	ENSG00000137960
RP11	ENSG00000213561
PTGFR	ENSG00000122420
RP4	ENSG00000235400

dbSUPER

Number of super-enhancer constituents: 9
ID	Coordinate	Tissue/cell

SE_13760	chr1:78442270-78446554	CD34_Primary_RO01536
SE_14888	chr1:78440854-78446748	CD4_Memory_Primary_7pool
SE_18555	chr1:78439946-78447087	CD4p_CD25-_Il17-_PMAstim_Th
SE_19704	chr1:78440503-78446337	CD4p_CD25-_Il17p_PMAstim_Th17
SE_21141	chr1:78441202-78446868	CD8_Memory_7pool
SE_21684	chr1:78442308-78446105	CD8_Naive_7pool
SE_22645	chr1:78440827-78446362	CD8_primiary
SE_35273	chr1:78442114-78446661	HeLa
SE_36446	chr1:78442383-78446764	HMEC

Enhancer Sequence

TCGGGAGGCT GAGGCAGGAG AATTGCTTGA AGCCGGGAGG CAGAGGTTGC AGTGGGACGA 60
GATCGCACCA CTGCACTCCA GTCTGGGCGA CAGAGGGAGA CTCCGTCTCA AACAAAACAA 120
AACAAAACTC CAGTATCTAC CTACAGTGTG CGATACCAAT TAATCCAATG TGCTGGTTCT 180
GGTAAAATAA AATAGTTGGT TCCAGTAAAT AAAATAGTTC CCTTAAGTTT TACAAATCAA 240
TCTAATAAAA CACGCTAAGA GTGTTTGTCA TAGTTATATG CTTGTTGCTA AACATGTTCA 300
GAATTTCTTA AATTACGTGG AAAAAACCGC AGAACTAATA TTAATGATGA CCTTTTGTTG 360
ACTACTCCTA GTATTTCTGG TTATAAAAAA GTACAGGTAC ATGTTTATAA TGCGTTCACA 420
TTAGATGTGT TACAACGGAT TTTATGAATT CTAATTTTGA CTCAATGTTC CTTCAACTGT 480
CCCGGTAAAA AGTTAACTAA GTGAACTCCT AATGCAACGA AAACACAGCA CAACACTGGT 540
TTCTAATTAT CATTAGCTTA AAACTAGTAA AAAATGCCCA GCACCTAGTA CAATATGCAT 600
AGTGTCACAG AGAATAGGAT TCTTTTGCTT ACATGCAAAT CTATACCAAC ACCATACATT 660
TTGAAATGTT AAATATATTA GGGGACTATC TAAGAATGTA AAGTTCAAAT TAAGGTATCT 720
TTTATTTTCC TGGAATACAC GCACTATTTT AACAGCTTTC GTCTGGGAAA GTGGTGCCTT 780
CAGGGCAAAT GCACGCACTA CGTAATACAA AGAGGTCTGG TCAGTTTACG ACTCTGAACT 840
GAGAGGCAGA TTCAAATTGA AACCTCTGGT ATAATGGGCC TGAGGCCATT TTGAGAAATA 900
AGGGGGGCGG ACTGGTGGAA CAGACTGACA CGTAAATCCC GCCCAGAAAA AGGCTGCTTT 960
CAAGTCCCTT CCTTGTAGAG GTGTGACGGT GAATGGTACT GAAAGCGGTT TTAATTGCGA 1020
GAGAGAACGG AAATGAGCTG TAAAGGCTAC TTTAATGATA AATCCCTTCC CTTGCTATGG 1080
CTCCAGGACA GACCCTAGTT CTTTCCCAAA CTCATTACCA GAACCTTCCA TTAAATTGTG 1140
TGAAACTAAC TGCGCTTTAT CCCCTGGAAG AGGATCTTTA TCTAAACTAG CTCACTGGAG 1200
ACACGCGAGT GCCGCAGAAG CGGGAGAAAG ACTTCAGGCC TTCTTTGCGT AGCACGCGTC 1260
GGGGTTCTAA GTGGATTAGG CACCAAGAAC ACAAAACTGG GTTCTGGTCT CTAATCGTTA 1320
TTACCAACAT GGGGAAACGT GTCTCTTCAC ATTTCAGCCC GGAAGAACAC CTCTTTCCTC 1380
TTCCTCATGC GCTTAAGGGT AGCGGCCTAC TCAGTCAGCG GCCAATTACC GTGAGCTTTC 1440
GGGATTCCGC CGCGCGGTCC 1460