Tag | Content |
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EnhancerAtlas ID | HS117-00133 |
Organism | Homo sapiens |
Tissue/cell | LHCN-M2 |
Coordinate | chr1:27863300-27865320 |
Target genes | Number: 20 | Name | Ensembl ID |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
RFX1 | MA0509.2 | chr1:27864100-27864116 | TGTTACCATAGCTACG | + | 6.61 | RFX1 | MA0509.2 | chr1:27864100-27864116 | TGTTACCATAGCTACG | - | 6.6 | RFX2 | MA0600.2 | chr1:27864100-27864116 | TGTTACCATAGCTACG | + | 6.54 | RFX2 | MA0600.2 | chr1:27864100-27864116 | TGTTACCATAGCTACG | - | 6.69 | RFX5 | MA0510.2 | chr1:27864100-27864116 | TGTTACCATAGCTACG | + | 6.07 | RFX5 | MA0510.2 | chr1:27864100-27864116 | TGTTACCATAGCTACG | - | 6.07 | ZNF263 | MA0528.1 | chr1:27863610-27863631 | GAAGGAGCGGGGGAGGGGGGA | + | 7.62 |
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| Number of super-enhancer constituents: 31 | ID | Coordinate | Tissue/cell |
SE_00527 | chr1:27863080-27864417 | Adipose_Nuclei | SE_00861 | chr1:27861963-27864577 | Adrenal_Gland | SE_02913 | chr1:27863208-27864567 | Bladder | SE_03261 | chr1:27863441-27864677 | Brain_Angular_Gyrus | SE_03939 | chr1:27861637-27864802 | Brain_Anterior_Caudate | SE_05196 | chr1:27861563-27864856 | Brain_Cingulate_Gyrus | SE_05814 | chr1:27860964-27864950 | Brain_Hippocampus_Middle | SE_06945 | chr1:27861896-27864522 | Brain_Hippocampus_Middle_150 | SE_07770 | chr1:27861456-27864855 | Brain_Inferior_Temporal_Lobe | SE_08936 | chr1:27863687-27864120 | Brain_Mid_Frontal_Lobe | SE_24033 | chr1:27863708-27864112 | Colon_Crypt_2 | SE_24711 | chr1:27863158-27863647 | Colon_Crypt_3 | SE_26518 | chr1:27861036-27866124 | Esophagus | SE_29557 | chr1:27862141-27864415 | Fetal_Muscle | SE_31394 | chr1:27862188-27864568 | Gastric | SE_34367 | chr1:27863121-27871533 | HCT-116 | SE_34755 | chr1:27863350-27872122 | HeLa | SE_35950 | chr1:27861343-27868167 | HMEC | SE_36974 | chr1:27861328-27874193 | HSMMtube | SE_40593 | chr1:27861294-27866055 | Left_Ventricle | SE_42106 | chr1:27861870-27865995 | Lung | SE_46630 | chr1:27863205-27864420 | Ovary | SE_48058 | chr1:27861994-27865651 | Psoas_Muscle | SE_48567 | chr1:27861805-27864738 | Right_Atrium | SE_49444 | chr1:27862439-27864550 | Right_Ventricle | SE_51091 | chr1:27861963-27867840 | Skeletal_Muscle | SE_51984 | chr1:27863440-27868100 | Skeletal_Muscle_Myoblast | SE_54527 | chr1:27861731-27864664 | Stomach_Smooth_Muscle | SE_63746 | chr1:27863403-27868144 | HSMM | SE_65253 | chr1:27861089-27864850 | Pancreatic_islets | SE_68682 | chr1:27862389-27864424 | H9 |
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| Number: 1 | ID | Chromosome | Start | End |
GH01I027535 | chr1 | 27861549 | 27873565 |
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Enhancer Sequence | CCAGCCTCCC CTGCTCCCTC CAAGGGCCCC GGGGCAGGCT GGGAGCCTCT GCACAAATCC 60 CTGCACCCCC ACCCCCACCC CAGGCCCTTA GCCACTGCCA GTGACCCTCT CTAAGCCAGG 120 TCTCCATGGT GATCTCAGCC CAGCAGGCGG CTCCTGCCAG AACCATTCCC GCGGTGCCTG 180 CGGCCAGGCA GCAGGAGGCT TTCTCACCCT CTGCTAAGCC GCCCATCGCG TCTCACCTTC 240 CTCCTCCCAC TACCCTCCCC AGCTTTCAGG ACTTGGCCAG CCAGAGACTT TGGCAGAATC 300 TTCGGGATGG GAAGGAGCGG GGGAGGGGGG AAATCAAAGC CCAAAAGCCC CAGGGTTCTC 360 TCATGGAGGT GGGGGAGAAT GCTGTGGCTG TGTGGAACCC TGACCTCACC AGGTTCAGCT 420 CTCCACAAAG CAGGACCAGA CACTAACGTG CCAGGCAGCC CAGTGCTAGG CACTGGGGAC 480 AAAGCAGAGA CCAAGACCGA TCTGGTTCCT GTCTTTGAGA GGCTCACAGA TAGAGGGGAA 540 AGCAAAGCAG ACCCCAAACC AGGGTAATTA CCACGCAGGG AGACAGGGGC TGTGCCACGG 600 AAGGTCCTGG GGAGGCAGCT AACCTGGTCG TGGCAGGAGA GACTGTGGCT CTTCAACCAC 660 TGCTGAACAC TACCCAGCAC ATGCTGGGGC CAAGACGTAC GCTGACTGAG TGACAGAGCG 720 GGGACTGACC TGAGTCTGGT CAGCATGTCA AGGTCCAGCT CCGGCCTTGC ACACCTTCAG 780 AACACCTCCT TAGACCACCC TGTTACCATA GCTACGGTAC CCTTGTCATC CCGACCTGGC 840 TCCTCCAGGG CAGGAACCTA TATGTGGTAC TGCTGCACAC CCAGGGCTAG CACGCACCGG 900 CCCCCAGCAC ACCAACCACT GTTCTGCAGA CTTCACCTTT TAGTGCCTCC GTGACACACA 960 ACTGCAGAGC CACATTCCTC TGAGTCCTCA TGCTCCGGTG GTTTCACCAT CTGAGGTGCC 1020 AGGGCATTAA GTGGTCTCTG CCTGTCAAGG GGGGGACTGG CACTGGCAGC AGTGAGGGAC 1080 AGCTGAGCAG AGATTCAAAG TGCTGCAGAG CACATATAAA TCAGGTTGTC CAGAGGGGGC 1140 TGCTCTCCTC CAAAAAGGAA AAGGAATATA TATTTGTGCT TTCATTTAAG TGAACAGCAA 1200 ACATGTATTC ATGCCCACTG GCTGCCAGGG CATGAGTTAA GGTCTAACCT CTACTCTCTA 1260 GTCTCTACTC TCTTGAAAGG GTCCAATGTC AAACAAGGCA GTAGAGCAGA AGGCAAAAAA 1320 GAGTGCATGA GGCCGGGCAG GGTGACTCAC GCCTGTAATC CCAGCACTTT GGGAGGCCGA 1380 GGTGGGTGGA TCTCTTGAGC TCAGGAGCTC AAGACCAGTC TGGCCAACAT GGAGAAACCC 1440 CGTCTCTACA AAAAATACAA AAACTAGCCA GGTGTGGTGG CACACACCCT GTAACCCCAG 1500 CTACTCGGGA GGCCGAGGCA TGAGAATTGC TTGAACCCAG GAAGCGGAGG TTGCAGTGAG 1560 CTGAGATCGT GCCACTCCAC TCCAGCCTGG GTGACAGAGC AAGACTGTCT CAAAAAAAAA 1620 AAAAAAAAAC CAGAAAAGAA AAAGTGCATT AGAATTTGAG AGGCTGATTT CCTGTGTGAC 1680 CCAGAGTAAG TCCCTTCCCT CTCTGGGCTT CAGGTTTTTT TGGTTGTTTT TTGTTTTTTT 1740 TTTGAGACAG GTTCTCACTC TATCACCCAG GCTAGAGTGC AGTGGCACAA TCACGGCTCA 1800 CTGCAACCTC CACCTTCCAG GCCCATGAGA TCCTCCCATC TCAGCACCTT GAGTAGCTGG 1860 TACTACAGGC GCACATCACC ACACCTGGCT AATTATTTTA TTTTTTGAAA AGACAAGGTT 1920 CCATCATGTT GCCCAGGCTA GACTCGACCT CCTGAACTCA AGCAAACCAC CTGCCTTGGC 1980 CTCCCAAAGT GCTGGGATTA CAGGTGTGAG CCACTGCAGC 2020
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