| Tag | Content |
|---|
EnhancerAtlas ID | HS117-00131 |
Organism | Homo sapiens |
Tissue/cell | LHCN-M2 |
Coordinate | chr1:27830400-27831730 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| EWSR1-FLI1 | MA0149.1 | chr1:27830565-27830583 | GGAACGAAAGCAGGAAGA | + | 6.13 | | STAT1 | MA0137.3 | chr1:27831609-27831620 | TTTCCCAGAAA | - | 6.02 | | STAT3 | MA0144.2 | chr1:27831609-27831620 | TTTCCCAGAAA | - | 6.32 | | ZNF263 | MA0528.1 | chr1:27831218-27831239 | TGAGAATGGGGAGGAGGGAGG | + | 6.04 |
|
| | Number of super-enhancer constituents: 30 | ID | Coordinate | Tissue/cell |
| SE_02913 | chr1:27830213-27831026 | Bladder | | SE_02913 | chr1:27831120-27832355 | Bladder | | SE_05196 | chr1:27829210-27833352 | Brain_Cingulate_Gyrus | | SE_05814 | chr1:27829181-27832931 | Brain_Hippocampus_Middle | | SE_06945 | chr1:27829261-27832857 | Brain_Hippocampus_Middle_150 | | SE_07770 | chr1:27829738-27832662 | Brain_Inferior_Temporal_Lobe | | SE_23188 | chr1:27830280-27832092 | Colon_Crypt_1 | | SE_24033 | chr1:27830527-27830952 | Colon_Crypt_2 | | SE_24033 | chr1:27830969-27832275 | Colon_Crypt_2 | | SE_24711 | chr1:27830217-27832142 | Colon_Crypt_3 | | SE_25901 | chr1:27830171-27832637 | Duodenum_Smooth_Muscle | | SE_26518 | chr1:27830129-27832742 | Esophagus | | SE_27625 | chr1:27830080-27832462 | Fetal_Intestine | | SE_28547 | chr1:27830055-27832555 | Fetal_Intestine_Large | | SE_29557 | chr1:27829444-27832772 | Fetal_Muscle | | SE_31394 | chr1:27830159-27832397 | Gastric | | SE_33477 | chr1:27830354-27831735 | H2171 | | SE_34755 | chr1:27830079-27832086 | HeLa | | SE_35950 | chr1:27830256-27832335 | HMEC | | SE_36974 | chr1:27829579-27833069 | HSMMtube | | SE_39896 | chr1:27830278-27832548 | K562 | | SE_40593 | chr1:27829483-27832634 | Left_Ventricle | | SE_42106 | chr1:27830105-27832560 | Lung | | SE_48058 | chr1:27830093-27832593 | Psoas_Muscle | | SE_48567 | chr1:27830115-27832554 | Right_Atrium | | SE_50130 | chr1:27830153-27832341 | Sigmoid_Colon | | SE_51091 | chr1:27829612-27832640 | Skeletal_Muscle | | SE_52467 | chr1:27830150-27832427 | Small_Intestine | | SE_62718 | chr1:27801410-27856116 | Tonsil | | SE_65253 | chr1:27830186-27832347 | Pancreatic_islets |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I027502 | chr1 | 27828889 | 27832715 |
|
Enhancer Sequence | CCTCTACAGA GGGGTCTGAC TGGATAAAGA CAAAGTGTGA AAGTGTATGA CTTTCACAAA 60
ACAAGAAAGC CAAGCCCCGT GTGGGGTGAC AGGGTGCAGG GATGGGAGAT GGCACTCAGG 120
GAGCTAGCAC TGGACAGGCC AGTGATTCCG AAGACAGAGG ATAAAGGAAC GAAAGCAGGA 180
AGAGAGGGAA TGAGTTATGG GTGAAATATT CGGATCCTGT AGCCTCCATA GAAGGTGGCC 240
AAGTGGGCAG GGGGCAAAGT CCCAGCCAAG CCCCTCAGCA CCCCCATGTG TTCCCAGCCC 300
TGCTGAGCCC TGCAGCTCGT CTCCTCCTGG CTCCAAAAGT CAGACCAAAC CCCGGAGAAC 360
AGAGGCGGGT GAGGAGGGGG CGGTGGGGTA CAAGCCCAGG CCTCTCACCC CAGCAAAGCC 420
TGCCTTCCCA GTGCCTGGGG CCAACCCAGC TGAGAAGCCA GAGGTTACAG GGAAAGGATT 480
AAGGAGTTGC TTGCTTTTTT ACCCAAACTC TGCTGTATTT CTCTGTCTTT CTTCAATCTC 540
TCTCTCTCTC TCTTTTTTTT TAAAGAAAAA TATTCCTGTA CACGCACCCA GAGGCTTTTG 600
CAGGAGGCGG CTGTTGGAGA ACTGGGAAAA CAAGCCAAGA AACAAGAGAG AGGAAAAAGA 660
CCACGCCTCG CCTGGCAGAT TCCTAATGGC CCAGGAGACC TGAGGCTTTA CAGTGGGAGG 720
CCGGTGGGGG CTGGCTCGGG TGGGAGGGAA GGGCAGGCCG AAGGACAGCC ACTTGCTGGC 780
TGGTGACCTT GGGCGGGATA CTGCCTGCTT CCCTCTGGTG AGAATGGGGA GGAGGGAGGC 840
AGGGGCAGGC CTGGCCGGCT GAGGTCACAG GAAGGCCCCT TCCAGCCTGA AACGCGATCT 900
CGGGATGTGG GGCCTGCCAA CCTGCAGCGA CCCTGGGCCA GCAGAGATGA AAGGCTGCCT 960
GTCCCCAGCT TCCGGACCCC CAAGGCCCCA CTGCCTCAAA GTTGGAGAGC AGCAGAGCTG 1020
TGTTGCCACT GGCTGGGGCC AGCTGCTGGG CTCCCCACCC CACCTTATGT CATCCAACCC 1080
TCCCTTCCCT GTTTTGCAGA GGACACTCAG GCCCAGAGAG GGTGGTGACC TGCCTGAGGT 1140
CACACAGCAA GCGGGAGTCT GAGCCAAGGC TCACCACAGT CTTTGGACTC CAAGTCCAGG 1200
CCTCCTGCCT TTCCCAGAAA CTTGGCTGCC TGGGGGCTTA CCCTGGGGAG TTGGAGAGAA 1260
CTAGGGCTGG GGAGGACACT TAGGAGCTGT GTCTGTTTGA AGTCACAACT TAATGTTGAC 1320
TAAAGTGCTT 1330
|
