EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS117-00128

Organism

Homo sapiens

Tissue/cell

LHCN-M2

Coordinate

chr1:27692040-27692740

Target genes

Number: 18
Name	Ensembl ID

FAM46B	ENSG00000158246
SLC9A1	ENSG00000090020
RP11	ENSG00000229985
SNRPEP7	ENSG00000225990
TMEM222	ENSG00000186501
SYTL1	ENSG00000142765
MAP3K6	ENSG00000142733
FCN3	ENSG00000142748
GPR3	ENSG00000181773
WASF2	ENSG00000158195
RP1	ENSG00000237429
AHDC1	ENSG00000126705
IFI6	ENSG00000126709
FAM76A	ENSG00000009780
RP3	ENSG00000231344
STX12	ENSG00000117758
PPP1R8	ENSG00000117751
RPA2	ENSG00000117748

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

E2F6	MA0471.1	chr1:27692118-27692129	CTTTCCCGCCC	-	6.32
KLF16	MA0741.1	chr1:27692726-27692737	GCCCCGCCCCC	+	6.02
KLF5	MA0599.1	chr1:27692099-27692109	GCCCCGCCCC	+	6.02
KLF5	MA0599.1	chr1:27692425-27692435	GCCCCGCCCC	+	6.02
KLF5	MA0599.1	chr1:27692726-27692736	GCCCCGCCCC	+	6.02

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

SE_34417

chr1:27690765-27694847

HCT-116

Enhancer Sequence

GCCGAGCATC CGGGCTGGCT GGAGGGAGGA GTGACTCGCG GGGGAATAGC CTCCTTCTGG 60
CCCCGCCCCT GAGCCATCCT TTCCCGCCCA CTTCCCCGCC CCTTCCCCGC CCATTCTTTC 120
TGGGCCGCTG AGGCCACTTA ACCTAAGCTC CCTCACCCAG TATCCAGTCC CGTCGGGCCC 180
CTTCGCTTCT CTTTTTGCCT CTCCTAGCCC GATCCTTGGA AATAGTATGC TAGGACTCCT 240
GAACTCCAGC CTCCCGGCCC CTTTCCCTAA GTCCAAGCTC CTCTCCCAGT AATTGTCCTC 300
AAGAGATCCG CGTGACATTC TCCTGAGGGT GAGGCTGAGT TCTCCAACCC CACCCCTGAG 360
ACACCACAGC CCCGCGCCGC TCCCCGCCCC GCCCCAGAGT TCCAAAGCCC CTCCCCATCC 420
TTGCCCCGCT GGCTGGGCAC CGCTCCGACT GAAGGGTGCC TAAGCCCCAA CCTCGAGCCC 480
TAGAGCCGCG CCCGGATCCC TGTCTCGTCC CGAGCCCGGC CGCGCCCCAG ATCCCCTAAA 540
TCCCACTTTT TTCACGGCCC TGTCCCAAGC CCTTCAGCTT TAGCTCACTT TAAGTCCCCT 600
AGACCCGGTA CCCCTCTCGG CCCCTCCCTT GAGCCTTCGA GCCCGGCTTG GTCCCCTCCC 660
AGGACCCTGA GTCCCGCCCG GATCCGGCCC CGCCCCCAGC 700