| Tag | Content |
|---|
EnhancerAtlas ID | HS117-00125 |
Organism | Homo sapiens |
Tissue/cell | LHCN-M2 |
Coordinate | chr1:27445580-27446550 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| EBF1 | MA0154.3 | chr1:27445934-27445948 | GGTCCCAAGGGATT | - | 6.1 |
|
| | Number of super-enhancer constituents: 12 | ID | Coordinate | Tissue/cell |
| SE_04452 | chr1:27443699-27446281 | Brain_Anterior_Caudate | | SE_08182 | chr1:27443042-27446505 | Brain_Inferior_Temporal_Lobe | | SE_09350 | chr1:27445040-27447869 | CD14 | | SE_26354 | chr1:27443495-27446678 | Duodenum_Smooth_Muscle | | SE_31553 | chr1:27442876-27446707 | Gastric | | SE_37352 | chr1:27442925-27447248 | HSMMtube | | SE_41510 | chr1:27443887-27446730 | Left_Ventricle | | SE_42522 | chr1:27440149-27447035 | Lung | | SE_49041 | chr1:27442852-27446947 | Right_Atrium | | SE_50517 | chr1:27440047-27446702 | Sigmoid_Colon | | SE_52500 | chr1:27440956-27446627 | Small_Intestine | | SE_53642 | chr1:27440347-27446821 | Spleen |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I027114 | chr1 | 27440693 | 27447290 |
|
Enhancer Sequence | TGCTGAGCAG ACACCTCACC AAACTTCCAA TTGATGGAGG CTCCCAGCCC CCTGCGGCTG 60
CTCTGCACCA CAAGAATGTT TTATTTATAT CTCCTCGGAC GGTCCCCATC TGTTGAGACT 120
GGCTCAGTGG AGCAGGCAAG GCTGTCCGAC ATCACCCTGG GTTGCCAGGG TGACCAGACA 180
TGCCTGATCC CCCTTCCCGC AACCCTCCTC TGGCCTGGGA AGTCAGAGGG GAGTGCTGGG 240
AAGAGGGGTC TCTTTGGCCC ATAGTGCCAG GTCACCAGGG ACCCAGGGGC ACACTGAGGG 300
CTCTGTCGCC CTACTTCCAG GCCTGAGGAC TGCTCTGGGG CTGCAACTCG GCCAGGTCCC 360
AAGGGATTCC TAGTTGCACA ATGATTCCAT TTCTTTAACT CCCTCTTCAA CTGCCCCAGC 420
AACCAGTCTC AACTGCAGCA ATGAAAGGTA ATACTTCCCA ATGAAAGCCC AGCACTCTAC 480
AGTTTACAGC GGCACACTCT TAACCCATTT GCTCTCCACC ATAGTTCTGG GAAGTCACAA 540
TTACCATCCC CTTATTTTAC AGATGAGGAA ACTGAAGCAC ACAAAGGTTA AGCAACTTGA 600
TCAAAGTCAC ATGGCTGGTA ACTGGGATTC AAACCCAGGT AGTCTGGCTC CAGAGTCTGT 660
GTTCTTGGCC ACTCACTGTA TTATCCCTGG CTTTATTCTT ACTTTGTTTC TAAGGGGCGT 720
GTGAGCCTAG GACTAAAGAG GCCCAAAGCA GTTCCCAAAG GGCCAGCGGT AGGTTTTTCT 780
TTCCATGAGC TCTTCTCCAG GAAGTCTCCC ACTGCTTCTA CTCTAGTGGC CTAGTAAAGA 840
CTTCATGAAA TCCTTCCTAT CTTCAAAGGC TGCCCTCTCC AGGAAGCTCT CCTAAGTTAA 900
CTCAGCCAGG AGGGGAAGGT TGCAGTGAGC CAAGATTGCA CCACTGCACT CCAGCCTGGT 960
GACAGAGCAA 970
|
