EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS117-00074

Organism

Homo sapiens

Tissue/cell

LHCN-M2

Coordinate

chr1:17222640-17223280

dbSUPER

Number of super-enhancer constituents: 61
ID	Coordinate	Tissue/cell

SE_01476	chr1:17222603-17223508	Adrenal_Gland
SE_03430	chr1:17222576-17222889	Brain_Angular_Gyrus
SE_03430	chr1:17222956-17223610	Brain_Angular_Gyrus
SE_04111	chr1:17222493-17223603	Brain_Anterior_Caudate
SE_05172	chr1:17221303-17223858	Brain_Cingulate_Gyrus
SE_06210	chr1:17221895-17223920	Brain_Hippocampus_Middle
SE_07232	chr1:17222100-17223822	Brain_Hippocampus_Middle_150
SE_08076	chr1:17221301-17223917	Brain_Inferior_Temporal_Lobe
SE_08889	chr1:17222644-17222799	Brain_Mid_Frontal_Lobe
SE_08889	chr1:17223035-17223167	Brain_Mid_Frontal_Lobe
SE_10448	chr1:17221613-17223800	CD19_Primary
SE_11024	chr1:17221275-17224129	CD20
SE_12131	chr1:17222521-17223709	CD3
SE_12912	chr1:17221738-17223086	CD34_Primary_RO01480
SE_13570	chr1:17221694-17223831	CD34_Primary_RO01536
SE_14124	chr1:17222285-17222970	CD34_Primary_RO01549
SE_14531	chr1:17221328-17224027	CD4_Memory_Primary_7pool
SE_15440	chr1:17221729-17223631	CD4_Memory_Primary_8pool
SE_15839	chr1:17221528-17223618	CD4_Naive_Primary_7pool
SE_16401	chr1:17221473-17223631	CD4_Naive_Primary_8pool
SE_17223	chr1:17222315-17223101	CD4p_CD225int_CD127p_Tmem
SE_17223	chr1:17223141-17223660	CD4p_CD225int_CD127p_Tmem
SE_17702	chr1:17221366-17223904	CD4p_CD25-_CD45RAp_Naive
SE_18224	chr1:17221267-17223871	CD4p_CD25-_CD45ROp_Memory
SE_19865	chr1:17222287-17223215	CD4p_CD25-_Il17p_PMAstim_Th17
SE_20182	chr1:17221532-17223806	CD56
SE_20877	chr1:17221535-17223682	CD8_Memory_7pool
SE_21501	chr1:17221535-17223662	CD8_Naive_7pool
SE_22012	chr1:17221512-17223906	CD8_Naive_8pool
SE_22656	chr1:17221539-17223975	CD8_primiary
SE_23911	chr1:17222621-17222889	Colon_Crypt_2
SE_23911	chr1:17222890-17223427	Colon_Crypt_2
SE_25305	chr1:17222596-17222891	Colon_Crypt_3
SE_25305	chr1:17222972-17223475	Colon_Crypt_3
SE_27153	chr1:17222579-17223678	Esophagus
SE_28353	chr1:17221401-17223802	Fetal_Intestine
SE_29508	chr1:17221377-17223896	Fetal_Intestine_Large
SE_29649	chr1:17221465-17223669	Fetal_Muscle
SE_31118	chr1:17221531-17223773	Fetal_Thymus
SE_31881	chr1:17222581-17222928	Gastric
SE_31881	chr1:17222961-17223677	Gastric
SE_33013	chr1:17222750-17223693	H1
SE_33540	chr1:17222554-17223852	H2171
SE_35172	chr1:17221719-17223894	HeLa
SE_40019	chr1:17221799-17223840	K562
SE_42843	chr1:17222553-17223687	Lung
SE_47744	chr1:17222619-17222892	Pancreas
SE_47744	chr1:17222996-17223490	Pancreas
SE_51608	chr1:17222444-17223863	Skeletal_Muscle
SE_53155	chr1:17222570-17223742	Small_Intestine
SE_53544	chr1:17222357-17223802	Spleen
SE_54964	chr1:17222177-17224104	Stomach_Smooth_Muscle
SE_55554	chr1:17222626-17222911	Thymus
SE_55554	chr1:17222979-17223500	Thymus
SE_61917	chr1:17221528-17256732	Toledo
SE_63124	chr1:17215209-17241689	Tonsil
SE_63250	chr1:17222916-17254487	GLC16
SE_63321	chr1:17222804-17249569	NCI-H82
SE_65449	chr1:17222675-17223638	Pancreatic_islets
SE_66885	chr1:17222554-17223852	H2171
SE_68996	chr1:17222553-17223525	H9

Enhancer Sequence

TTTCTGGAGT TTCTAAAAGT AGACTGTACG CTAAGGGTCA TATCTTTTTT TGTTTTGGTT 60
TGTGTCTTGG TTGGCGTCTT AAATGTTAAT CCTACAGTGG AGGGCTGGCG AATAGGAAGT 120
AACATGTCGC CTGCACGCCA TAGGAGAAAA AGCGAGCATC AGCCGTATCG GCTTTGTAAC 180
ACAAATTAGC TATCGTGAAG TCCGCTCAGC TCTTCCCTTT CTACCCTGGC TGCTTTTTGC 240
AGGGATTGGT CCGTGGTCTC CAGTCTCTTG GGTTCTCACC CTGTGTGAAA ATCTTCCTGT 300
TTTTCCCTAC CCCCCAAGTC ACCTCTTACA CAGCCTCTGC TTCCAAGCGC AGCCCCCACA 360
GGAGTTTGTA GGATTTCTGT GCTAGCGGGG AGTGTGTTCT CACCTCATAG AGCCAGGTAG 420
AAACTACGCA GATGGGTGCT GTTCTCCAGG AAGAAAGCAG GGCCTTTGGG GCTCTCAGTG 480
TCCCCGTTGG GTTGTAGACA TAACACGCTT ACTTTGCGTA GGGGAACGGC TCTGCCGGCC 540
CCCAGGTGCC CTCGCGCATA TTCATGGAGG CCCGTAGGTC AGAACCGCAG TCTCACCTGT 600
CTTGGCGGAA ATGCCCTGCG ATCCTCCCGG AGATAGAAGG 640