Tag | Content |
---|
EnhancerAtlas ID | HS116-00748 |
Organism | Homo sapiens |
Tissue/cell | Left_ventricle |
Coordinate | chr1:27474580-27476620 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
IRF1 | MA0050.2 | chr1:27476050-27476071 | GGAGAGAAAGAGAAAGTGACT | - | 6.76 | Nr2f6(var.2) | MA0728.1 | chr1:27475353-27475368 | GAGGTCATAAGGTCA | + | 7.63 | RARA | MA0729.1 | chr1:27475353-27475371 | GAGGTCATAAGGTCAGCC | + | 6.94 | SOX10 | MA0442.2 | chr1:27475554-27475565 | AAAACAAAGGA | + | 6.32 | SPIC | MA0687.1 | chr1:27476093-27476107 | CAAAAGGGGAAGAA | + | 6.21 | Sox3 | MA0514.1 | chr1:27475554-27475564 | AAAACAAAGG | - | 6.02 |
|
| Number of super-enhancer constituents: 11 | ID | Coordinate | Tissue/cell |
SE_01262 | chr1:27475830-27476567 | Adrenal_Gland | SE_04452 | chr1:27474703-27477513 | Brain_Anterior_Caudate | SE_08182 | chr1:27474493-27477860 | Brain_Inferior_Temporal_Lobe | SE_09350 | chr1:27475396-27477103 | CD14 | SE_31553 | chr1:27474444-27477774 | Gastric | SE_41510 | chr1:27474528-27477366 | Left_Ventricle | SE_42029 | chr1:27475962-27476607 | LNCaP | SE_42522 | chr1:27474662-27477262 | Lung | SE_49041 | chr1:27475070-27477135 | Right_Atrium | SE_52500 | chr1:27475103-27476618 | Small_Intestine | SE_53642 | chr1:27475704-27476774 | Spleen |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr1 | 27475439 | 27475550 | chr1 | 27475723 | 27476085 |
|
| Number: 1 | ID | Chromosome | Start | End |
GH01I027148 | chr1 | 27474529 | 27477366 |
|
Enhancer Sequence | AGGTATCTTA ACCTTTCACC CCATCCTACA TGTTTTCCAT TGTAATCATT TCTCTGCCTC 60 TCCTTTTCTC TCCCAGAGGG CATGCAACAT TCTGGGGGAA AGGACAAGTC CTCCATTTCA 120 AAGATTTGCT GCTCCACAGA TAAGGGCTAT GAGAATGTCA GTCCCCAGTG CAACTCTGGC 180 CCTCATCCTC CTTCATGCAA ATACAGGTAT GTTCAAGTTG TAGAAAAGAA CTTGGAGCTG 240 AGCCAAAGCT GTCAAGGCTC CAGACCACCC AGACCCTTTA GCCCTTCCTG CCTACAGGAG 300 GAACAGGTGT CCCTCCTGAC AACAATCCAG GTTACCAATG TGGATGTGTC TGGTCATTGA 360 CTCTCCTCAA AGCCCCTTTA AATCTCTCAT CCCCCTTGAT CCAACAAGAA CCCAGCATGT 420 TGGCCTGGCA GGAGAGAGTT TGGCCTTGAG TGATTAGTCC CAGGCATGCT AAGTGACCTC 480 AGGCAGGTCA CAACCGAAGG CTCAATTTCC TTAGATGTAA AATGATGAAC ACATCAATAC 540 CACATGCTAT TCTAACCCAC AGGACCACTG AGAAGATCTA AATTAAATAT TGTACACACA 600 AGTGCTTTGG AAACAAATTT CAGTGCTAAT GAGAAGTACT ATTAAACTCC TCCTGCCTTG 660 TAGAGCTAAA CAAAGTTGTG CCACCTGCTC CCAACAGAGG CTGCCTCTCA GGGGACTCTG 720 CTGGGCCCTG AGGGTAACCA AAAGCAGCCT GTCACCTTTC TGCTCAGAGG CGGGAGGTCA 780 TAAGGTCAGC CACCCCTTGT GGCTAAAGGA GACCACCCTT TACCTGGCAC TTCCCTGCCC 840 AAGCAGGGAA GAAGCAAGCT CTGGTCTGAT GGCTGAGAGG GCACCGGAAG AGAGATAGCA 900 GGCAGGGTTG CTAGCAGAGA ACAAGGGATA GGCCTCCTGA ATGCAGGATT CAGGTGCATC 960 CAAGAAGACT CACAAAAACA AAGGACAGGT GCACAGCTGG ACACAGAACA CCTACAGCTT 1020 TCTCAAGGCA GGGACAGGGC TCCCACCAAC GACATGTGCC CAACTCCTAG AGGGAGTCCT 1080 ACAATTCCTG AGTGCAGGTG CAGTGAGCTG GGCGCTTCTC AGTGCAGGGC CATGTGCATC 1140 TGCTGCGGGA ATGCCAGAGG CAGGAGATGC AGCTGCACCC CTCTAGCAGG CTATGCCAAG 1200 ACTCGAACAG ACAATAAATA GCAATTTGAC ATCACTGAAG ATAACCTCTC TGAGCCATTT 1260 CCTCATCTGC AAAACAGAGA CAGCTTTTAT CTCATGTGAT TTGAGTAGGG ATTAAATAAG 1320 ATTGCTTTTA TAAAGTGCCT GACACTACTC TGTAGATACT AAGTGGCAAC TATTATTAAA 1380 ACACACACAC CCGTTCAACA CAGGAGATGT CACAGGGCAG GCAAGGCCTA ATGCCACTGT 1440 TATGGATAAA CAATAAGGGA AAAGGGTTTG GGAGAGAAAG AGAAAGTGAC TGCTGTGGGC 1500 TGGGAAGACC TCCCAAAAGG GGAAGAATCT GCACGGCCCT GAAAGTTACT ACAGTGAGCT 1560 GGGCACTCTA CCAGGCATTC CCACGTTCAG CCTCTACGTT GGTCTTAAGG ATGAGGCAAG 1620 TCAGGTTCAG AGAATGAGGT GCATGAACCT CAAGGTTCAT GGTCACACAG GTACTGAGAG 1680 GCAGCATCAG GAGCAGAACC CAGGGCTTCT GACTACGTCT TTCCTTTGTA CCAGGGCTGG 1740 ACGCCATGGG GCTGGCTTGG AAGGAGAGGA AAGGCAAACT TCGAGGGTGC TCAGCTGAAT 1800 GAAGTCTGGG CAATCTGACC AACTAAGCCC TCTAAGTGCC TTGGCACTCC TAGAGACACA 1860 TGTCCTACCT GAAGCCTTCC TCCCAGTCCC CAGCTGACCT CCCTCCCACT GTTCTGCAGT 1920 CAGTCTGCTA TTTTCCCAAA GAGAAAAAGG TCATCGCTTC CTTTTTAGAG TCCTATCTGG 1980 GCTTCTTGAG ACAGTTTCAA GGTGACCTTT AGGCTATTTG TTCTTCTCTT CTTTTGAGAA 2040
|