EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS116-00009

Organism

Homo sapiens

Tissue/cell

Left_ventricle

Coordinate

chr1:1364980-1365530

Target genes

Number: 4
Name	Ensembl ID

RP4	ENSG00000225905
ANKRD65	ENSG00000235098
VWA1	ENSG00000179403
ATAD3C	ENSG00000215915

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

FOXA1	MA0148.4	chr1:1365246-1365262	GTTTGTTTACTTAGAG	-	7.2
FOXP2	MA0593.1	chr1:1365247-1365258	TTTGTTTACTT	-	6.62

dbSUPER

Number of super-enhancer constituents: 9
ID	Coordinate	Tissue/cell

SE_06548	chr1:1363395-1374936	Brain_Hippocampus_Middle
SE_07177	chr1:1359555-1373177	Brain_Hippocampus_Middle_150
SE_27377	chr1:1364771-1372485	Esophagus
SE_28450	chr1:1364670-1371175	Fetal_Intestine
SE_30150	chr1:1364545-1371040	Fetal_Muscle
SE_32015	chr1:1364846-1372130	Gastric
SE_33709	chr1:1364422-1373917	H2171
SE_43332	chr1:1364851-1372426	Lung
SE_67118	chr1:1364422-1373917	H2171

Enhancer Sequence

TTGTTTAATT GTCAGCTGTT ATCGGAGACA ATTCTGAGGT CCAACTTGGG GATGCTTCCC 60
TCCAGAGACT ATTCCCCTTT TCCAGGCGAG ACCACCCTCG GCCCCCTCAG TGACCCTTGA 120
GACCCCTGGT TTAAGCAGCC CCTAGGCAGA GAAACATACT TGTTCCCTGG CCGCAGGCTG 180
GCTCTCTGTC CCTGTGTGTG TCCAGGGAGT TATCTGCTTT CCCAACCACT TCCCTTCATC 240
ATCCAGGCCT CCACACTACT CTGTCTGTTT GTTTACTTAG AGACAGAGTC TTGCTCTGCC 300
GCCCAGTCTG AGTGCAGTGG TGAGCTCCTA GCTCTCTGCA GCCTCGCCCT CCCAGGCTCA 360
AGTGATCCTC CTGCCTCAGC CTCCCAAGTA GCTGTGACTA GAGTGCACCA CCACACCCAG 420
CTAATTTTAA ATTTTTTTGT AGAGACGGGG TCTCATCATG TTGCCCAGGC TGGTCTCGAA 480
CTCCTAGGCA CAAGCAATCC TCTCGCCTCA GCCTCCTAAA GTGTTGGGAT TACAGGCATG 540
AGCCACCCCA 550