EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS113-00829

Organism

Homo sapiens

Tissue/cell

Keratinocyte

Coordinate

chr1:35549670-35552100

Target genes

Number: 10
Name	Ensembl ID

GJB5	ENSG00000189280
GJB4	ENSG00000189433
GJB3	ENSG00000188910
RP1	ENSG00000255811
C1orf212	ENSG00000163866
RP11	ENSG00000241014
ZMYM6NB	ENSG00000243749
ZMYM6	ENSG00000163867
ZMYM1	ENSG00000197056
SFPQ	ENSG00000116560

TF binding sites/motifs

Number: 8

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Arid5a	MA0602.1	chr1:35551880-35551894	ATTTTCAATATTGG	-	6.44
Myod1	MA0499.1	chr1:35551187-35551200	TGCAGCTGTCCTT	+	6.11
Myog	MA0500.1	chr1:35551186-35551197	CTGCAGCTGTC	-	6.62
NFAT5	MA0606.1	chr1:35549767-35549777	ATTTTCCATT	+	6.02
NFATC1	MA0624.1	chr1:35549767-35549777	ATTTTCCATT	+	6.02
NFATC3	MA0625.1	chr1:35549767-35549777	ATTTTCCATT	+	6.02
Tcf12	MA0521.1	chr1:35551186-35551197	CTGCAGCTGTC	-	6.14
Zfx	MA0146.2	chr1:35550891-35550905	CCCGCCTCGGCCTC	+	6.01

Enhancer Sequence

TCTCTGTGCA TCAGTGTACC TTCTAGCTTG TCTTCTTCAC TAATTTGATA TTCATCGATT 60
GAATTCTTAA CTTCCTCACT GTGTTTTCCA ATTCTAGATT TTCCATTTAA CTTTTTTTTT 120
TTTTTTTGAT GGATGCCAGG TCACTACAGA ACTTCTCCAT CTTTCCTCTG TTTTCTCAAA 180
CATAACCAAG TCCTTGCCTG ACAAGAACAA TATCTGAGTC ACCTGTGGGT TTGTTTCTAT 240
TGCCATTTTT TTCCAGTCAG TTTTGGGATT TTAAAAATTC CTCTTAGTCC ATAAATTATT 300
ACTGGATTCT GGAAATTTTG GATGAACATT ATTAGCATCC GGATGTACTT CCTTCAAAGC 360
AGACTAAGGT TGCCATTAGG CACGTGGATA GTAGTAGCAG ATGACATTGA TCCTGTTGAG 420
GGTTGATTAT AGGTCTTGTT AAGACTGGTC TATTTCAGTT TGTCCTTTCT TCTTGGAAGT 480
GGTCTCTTTT CCTCCTGGGG CATAGCCATT ACTCCTAGGG CAAGGCCCTC CTTGAGTCTC 540
AACCCGAAAT CCAGGTCTTT ACCAAAACCC CTCTATCTTG CTGGTCTTAA ATTTCAACTC 600
TCAACTCAGC ATAGCTGCTA TAATCTTATT AGCTCTTTGA CGTTTAACTG CTGTGTTCTG 660
TTAAGTTTTT GAAGTCTCAC TCTGTAAATG TGCAGTTTAG GAGTCCGCCA ATGACTTGGA 720
GGAGGGGAGA TTTCTATGCA TATTATTTTT CTGTAGTTCC CTCCTCTCCC AGATTGTGCC 780
TCTTGAGTTC CAGCTACTTT AGAATCCAGT ACTTCTAACT GTCTCCTGCT GTTTTCTGCT 840
TGGGTTTCCA CTATTTTGTC ATGGAAAGTC CCCTTACCAG TAAAGTCTGT TAAATTTTGT 900
AATTAATTCC AGTGAAAGGA TTTAGTATGC TAAAGGCTAC TCTGTTATGC CTGGATTTAT 960
CCGTTTTTTG TTTTGTTTTG GTTTGGTTTT TTTTTGGAGA CAGAGTCTCG CTCTGTCGCC 1020
CAGGCTGGAG TGCAGTGGCA CTGTCTCAGC TCACTGCAAG CTCCGCCTCC TGGGTTCACG 1080
CCCTTCTCCT GCCTCAGCCT CCGAAGTAGC TGGGACTACA GGTGCCCACT ACCACGCCTG 1140
GCTAATTTTT TGTATTTTTA GTAGAGACAG GGTTTCACCG TGTTAGCCAG GATGATCTCG 1200
ATCTCCTGAC CTTGTGATCC ACCCGCCTCG GCCTCCTAAA GTGCTGGGAT TACAGGCGTG 1260
AGCCACCGCG CCCGGCCCCC ATATTATTTT TACTTCATGC TAGTCTGTTA AAATCTGGAG 1320
CTCAGTTGGT TTCCAAACTG CATAGGATCT GATTAGGCAG AAATGACTTT GGCAGGAAGG 1380
AAAGCAGTAT GAGGACAAGT AAAGTGAGGA GGTTAAGGTG CAGCTGATTC TTTGCCTTGA 1440
CATCTGTCTC CCTTTCCCTC TGGCCCAAAG AGGAGGATAG TGTTTTCTCC TGTGGTTGTT 1500
GTAGATCTCC CTTTGGCTGC AGCTGTCCTT TCCTGACCCT GAAACCACCT CCATGACTAC 1560
ATTCCAGCTT CAGGGACAAT AGCCTCCTTC CTTGAACAGT CATTCCTAGA GCTCTCTTGG 1620
GCCTGCCCTT TCTTGCCTTT GGTGTGGCAC ATGCCAGCCA CCTAGCTCTA ATAGGGAATT 1680
ATTGTTGTTA AATCAGTATT CTGTACCCCT CATTCCCAGC CTAGTTTTGA AATGTACTTG 1740
TGGTTGGAGT GCTAGGTTCA CACTGGCCCC TAGCATTTGT GGGGTCCTTG CTAAGAGTAT 1800
GAATGGAAGC CCACATACTC TGTGTCTAAA TATTTAAAAG TTATAAATTA AGCTAACACA 1860
TCGTGGAATA AAATGAGTTC CATCCTCCTG CCGTGACAAA TACACCTTTG TAATGACCAA 1920
ATAGAAAAAC ACGTGTAAAG CTGTGGTTTT CAGGACTGAA AGTAAGCAAA TTTTCAATGA 1980
TGACAGAATT CAATTTTATG TATTACGTTT AAACATTGTA TTTGGGTTAC TCATGGTAAA 2040
TTGTTATCAC AGAAAATATT GAAGATTTGA ATTTCATTAT ATAAATCACT GTCATTCATA 2100
ATGTGGCTTT TTAAAATCAT TTCTTCAAGT CATATTTATA TTCATACAGA ATTTTAAGGT 2160
TTTTTCCCAA AATTTTCAAT ATATACAGAA TTTTAAGGTT TTTTCCCAAA ATTTTCAATA 2220
TTGGGTTATT AGTTTATTTT ATTTATTTAT TCTGAGATGG AATCTTACTC TGTCACACAG 2280
GCTGGAGTGT GGTGGCGCAA TCATATCTCA CTGCAACCTC TGCCTCCCAG GTTCAGGTGA 2340
TCCTCCTGCC TCAGCCTCCT GAGTAGCTGG GACTACAGTC TGGGCTATTT ATAAAAAGCA 2400
GAAAATGACT GTTTGTTGCT AAATTTGTTC 2430