EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS113-00058

Organism

Homo sapiens

Tissue/cell

Keratinocyte

Coordinate

chr1:2125570-2126120

Target genes

Number: 11
Name	Ensembl ID

NADK	ENSG00000008130
GNB1	ENSG00000078369
PRKCZ	ENSG00000067606
RP11	ENSG00000182873
C1orf86	ENSG00000162585
AL590822.1	ENSG00000203301
SKI	ENSG00000157933
RP4	ENSG00000238240
PEX10	ENSG00000157911
PLCH2	ENSG00000149527
RP3	ENSG00000224387

dbSUPER

Number of super-enhancer constituents: 14
ID	Coordinate	Tissue/cell

SE_24063	chr1:2125370-2125782	Colon_Crypt_2
SE_24063	chr1:2125797-2126200	Colon_Crypt_2
SE_28207	chr1:2123182-2126199	Fetal_Intestine
SE_29530	chr1:2123139-2127849	Fetal_Intestine_Large
SE_40333	chr1:2124747-2126026	K562
SE_46689	chr1:2124704-2125774	Ovary
SE_46689	chr1:2125778-2126171	Ovary
SE_47622	chr1:2125240-2125642	Pancreas
SE_47622	chr1:2125804-2126177	Pancreas
SE_54645	chr1:2120364-2127955	Stomach_Smooth_Muscle
SE_62490	chr1:2120386-2191742	Tonsil
SE_68393	chr1:2120436-2162432	TC32
SE_68394	chr1:2120436-2162432	TC32
SE_69135	chr1:2124723-2127875	H9

Enhancer Sequence

GCCTGGGGCA GACAGAGAGG GCAGACAGGG GGTACTCAGT AGCGGAAACG CTATGGTGGG 60
GAGACCCGGG AGGGCCTGGG GCAGAGAGAG CGGGGAGATG GGGGGTACTA GAGGGAAATT 120
CGATGGTGCG GGAGGTGGCC GGCAGGGTTG GGGGAAGGGC TGCTGGGGCA GACAGTGCGG 180
AGATGAGGGG TACTGGGGGT GGGGGAGCGG GGTGGGTGGG TGGAAATATG GGGTCCTCAG 240
CGGGATGAGG CGATGGTTGG GGAGATTGCG GAGGGCCTGG GGAAGGTAGA GGGTTAGATG 300
GGGGGTGCTC AGGGGAGACG CGATGATGGG AGAGGCGCGG GAGGGCCTGG GGCGGCGCGG 360
GGGAAGCTCG GCGTGGGGTG GGGGCTCAAG GCGGGCGCTG AATGGCGGCG CGGGGTGGGG 420
CGACGGGCGT GGGGGCCGGG CCCGGGGGCA GGGAGCCCTC CCCAGGGGGA GAATAGAGCG 480
GGAGGCCCGC GGGGGCGCCG GGAAGCACGT GGGAGCGGGA AAACCGGCCG CGCCCCCGCC 540
CGGCTCCCGG 550