EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS111-00105

Organism

Homo sapiens

Tissue/cell

Coordinate

chr1:27692020-27692740

Target genes

Number: 12
Name	Ensembl ID

RP11	ENSG00000229985
TMEM222	ENSG00000186501
U6	ENSG00000206888
SYTL1	ENSG00000142765
MAP3K6	ENSG00000142733
CD164L2	ENSG00000174950
RP1	ENSG00000231207
GPR3	ENSG00000181773
WASF2	ENSG00000158195
AHDC1	ENSG00000126705
RP3	ENSG00000231344
STX12	ENSG00000117758

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

E2F6	MA0471.1	chr1:27692118-27692129	CTTTCCCGCCC	-	6.32
KLF16	MA0741.1	chr1:27692726-27692737	GCCCCGCCCCC	+	6.02
KLF5	MA0599.1	chr1:27692099-27692109	GCCCCGCCCC	+	6.02
KLF5	MA0599.1	chr1:27692425-27692435	GCCCCGCCCC	+	6.02
KLF5	MA0599.1	chr1:27692726-27692736	GCCCCGCCCC	+	6.02

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

SE_34417

chr1:27690765-27694847

HCT-116

Enhancer Sequence

ATAAGCAAGT AAGTATGGGG GCCGAGCATC CGGGCTGGCT GGAGGGAGGA GTGACTCGCG 60
GGGGAATAGC CTCCTTCTGG CCCCGCCCCT GAGCCATCCT TTCCCGCCCA CTTCCCCGCC 120
CCTTCCCCGC CCATTCTTTC TGGGCCGCTG AGGCCACTTA ACCTAAGCTC CCTCACCCAG 180
TATCCAGTCC CGTCGGGCCC CTTCGCTTCT CTTTTTGCCT CTCCTAGCCC GATCCTTGGA 240
AATAGTATGC TAGGACTCCT GAACTCCAGC CTCCCGGCCC CTTTCCCTAA GTCCAAGCTC 300
CTCTCCCAGT AATTGTCCTC AAGAGATCCG CGTGACATTC TCCTGAGGGT GAGGCTGAGT 360
TCTCCAACCC CACCCCTGAG ACACCACAGC CCCGCGCCGC TCCCCGCCCC GCCCCAGAGT 420
TCCAAAGCCC CTCCCCATCC TTGCCCCGCT GGCTGGGCAC CGCTCCGACT GAAGGGTGCC 480
TAAGCCCCAA CCTCGAGCCC TAGAGCCGCG CCCGGATCCC TGTCTCGTCC CGAGCCCGGC 540
CGCGCCCCAG ATCCCCTAAA TCCCACTTTT TTCACGGCCC TGTCCCAAGC CCTTCAGCTT 600
TAGCTCACTT TAAGTCCCCT AGACCCGGTA CCCCTCTCGG CCCCTCCCTT GAGCCTTCGA 660
GCCCGGCTTG GTCCCCTCCC AGGACCCTGA GTCCCGCCCG GATCCGGCCC CGCCCCCAGC 720