EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS108-01197

Organism

Homo sapiens

Tissue/cell

K562

Coordinate

chr1:32566160-32567830

Target genes

Number: 11
Name	Ensembl ID

AL136115.1	ENSG00000212673
RP4	ENSG00000228634
PTP4A2	ENSG00000184007
KHDRBS1	ENSG00000121774
TMEM39B	ENSG00000121775
RP11	ENSG00000203325
KPNA6	ENSG00000025800
CCDC28B	ENSG00000160050
IQCC	ENSG00000160051
EIF3I	ENSG00000084623
TMEM234	ENSG00000160055

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr1:32567044-32567056	AAAAAAACAATC	-	6.44
NKX2-3	MA0672.1	chr1:32566543-32566553	ACCACTTGAA	+	6.02
Nr2f6(var.2)	MA0728.1	chr1:32566410-32566425	GAGGTCAGGAGTTCA	+	6.22

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I032100

chr1

32565757

32568182

Enhancer Sequence

CATGTGAGTC TCCTCCCCGG GGAAGGAGGG TTGGGGCCTG AGAGGGTGGG AGGATCTGCA 60
GGGCAGGAAT GTGATGTCAT TGCAAGAGAA AGCTATTTTC AGTATTTCCC CAATCCAAAG 120
GAAGACAGTG CACACATGTA GCACAAGGAC AGCCATATAA ATTGTCACTT AATAACTGCA 180
GCTCGGCCGG GCATGGTGGC TCACGCCTGT AATCCCAGCA CTTTGGGAGA CCAAGGCAGA 240
CAGATCACCT GAGGTCAGGA GTTCAAGACC AGACCAGCCT GGTCAACATG GTGAAACCTC 300
GTCTCCACTA AAAATACAAA AATTAGCCAG GTATGGTGGC GGGCGCCTGT AATCCCAGCT 360
ACTCGGGAGG CTGAGGAGGG AGAACCACTT GAACTCAGGA GACGGAGGTT GCAGTGAGCC 420
GAGATCATGC CACTGCACTC CAGCCTGGGC AACAGAGCAA GACTCATTCT CAAAAATAAA 480
TAAATAAATA ACTGCAGCTC ATTTGGTTGT AGATCTTTGA GAACATTGGA CAGAGGGAGA 540
GAAGATGATA CAGTAAAAGA AGGGGCTCTT GGCAGTGAAA GACAATACTG TCTTCATTTG 600
TTACTGTGTG CCAGGCATGT CGTTAAGCAC TCTCCATGTA CCTTCCTACT CAGCCTTACC 660
CTGAACCTTG TACGTGAAAG ATATGCTAGG GTTATCTCTG TTTTTAGATA CTGAAATCAG 720
CTAAGAGAGT TTAACTTGTT AAAGGGTGCC TTCTTGGGAA ACTTGAGAAC CTAATGGTAA 780
TGACTCATGA CTTAGCTATG GAAAGGGCTG CTCAAAATTA TCTAAACTAG TGATCTCTAT 840
TTTTTTTTAA ATTTCACTAT GAAATCCCCT CCCCCCCTTT TTTAAAAAAA ACAATCAGAG 900
GCCAAAATCC AATATATGGG ACATCCTGGC ACTGCTCTGT TTGGAGGAGT TAGAACCCCC 960
TTCACTTCCT GCTCACCCCC GCTGTAACTC CTAAAGGATC CCCTTGAAAC CTGGGGCTCT 1020
AAGGAACACA GCATGAGAAA TCACTGACCT AGACTGATGT CTTCATTTCA CAGTTGAGAC 1080
ATCCAAGCCC CAGAGAGGAA AGGGACTTGA CCAAAGTATT GCAGCCTGTT AGGTGCAGAG 1140
CTGAGCCTGA TATCCTGGTC TCTTGGCCTC CCATTTCCTA CCACTTCTCC TGTCCTGTAA 1200
GCAGCTCTTG AGATTTAGGT ACCTTGGCCC CTGTGGAATC AAAATCCCTA GACACTGTGC 1260
ACTCTTTTGA ACTCATCAGA GATTTTTTTT TAGTCCCTAC GTTCTACCTT GCTGTTGAGA 1320
GTGAGCTGTT GCCATGTCCC TTGGCAGCTT CCAGCCTAGC TAGGGATGTA CCTATGAAGT 1380
AGTAGGTAAT TCAGGCTGTA GAGTCTGTAA TAACTTTCCA TGCCTATGTC ATAGGATTCT 1440
AATTTGTTCA GGCCCAGCAA TACCCAGGAG ATGACATTAA AAGGTGTTGA TTTTATTGAG 1500
GGTCAGTGGA TGAGGGAGAA AAAGTTTTCA AAAATTAAAA AAAATTTTTT TAAAGGTGTT 1560
GACTTTAGAC CACAAAAAGA GTTTGAGAGA GCAAGCAGAA CCTGTCAAGA AAGACTTCCT 1620
AGGGGAGGTA GAAGTTGAAC AGGATCTTAG ATGACTTACA TCAGAAGCAG 1670