EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS108-00935

Organism

Homo sapiens

Tissue/cell

K562

Coordinate

chr1:26799120-26799970

Target genes

Number: 18
Name	Ensembl ID

FAM54B	ENSG00000117640
C1orf135	ENSG00000127423
RP1	ENSG00000223624
STMN1	ENSG00000117632
TRIM63	ENSG00000158022
PDIK1L	ENSG00000175087
ZNF593	ENSG00000142684
RP11	ENSG00000236782
CEP85	ENSG00000130695
SH3BGRL3	ENSG00000142669
CD52	ENSG00000169442
UBXN11	ENSG00000158062
AIM1L	ENSG00000176092
ZNF683	ENSG00000176083
LIN28A	ENSG00000131914
DHDDS	ENSG00000117682
RP3	ENSG00000223583
HMGN2	ENSG00000198830

TF binding sites/motifs

Number: 14

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

E2F6	MA0471.1	chr1:26799462-26799473	GGGCGGGAAGG	+	6.62
KLF16	MA0741.1	chr1:26799553-26799564	GCCCCGCCCCC	+	6.02
KLF5	MA0599.1	chr1:26799553-26799563	GCCCCGCCCC	+	6.02
KLF5	MA0599.1	chr1:26799531-26799541	GGGGCGGGGC	-	6.02
Myod1	MA0499.1	chr1:26799708-26799721	TGCAGCTGTTGCT	+	6.64
Myog	MA0500.1	chr1:26799707-26799718	CTGCAGCTGTT	-	6.02
RFX5	MA0510.2	chr1:26799651-26799667	GGCTGCCATAGCAACG	-	6.35
RFX5	MA0510.2	chr1:26799651-26799667	GGCTGCCATAGCAACG	+	6.3
SP1	MA0079.4	chr1:26799529-26799544	GAGGGGCGGGGCTTG	-	6.34
SP1	MA0079.4	chr1:26799550-26799565	ATGGCCCCGCCCCCT	+	6.39
SP2	MA0516.2	chr1:26799528-26799545	TGAGGGGCGGGGCTTGT	-	6.54
SP4	MA0685.1	chr1:26799527-26799544	GTGAGGGGCGGGGCTTG	-	6.16
SP4	MA0685.1	chr1:26799550-26799567	ATGGCCCCGCCCCCTCG	+	6.55
Tcf12	MA0521.1	chr1:26799707-26799718	CTGCAGCTGTT	-	6.62

Enhancer Sequence

ACGTGGCGCG AGGGCCCCAG GCGCCGGGCC ACCACTGCCG CCACCGCCGC CGCCGCCTCC 60
CTGGTGCAGG GAGCGAGAAT CGGCGCCGAG CAGGAGCCAG CGCAGCCTCC CCGCGCGGGG 120
GCTGGAGACG GTGTCGGGCA GCTCGGGGCT AACCCTGAGC GGCTCGGCTG CCCGCGGGCG 180
CCAGAGGCCA TATTGGAGGA GCGGCGGCCG CGGCGGGAGG AGCCATGTTG GCGGCTGTTT 240
ATCCCGCTCT CCTCGGGCTC GCCGCCCCCG CCCCGTGCCC CCTCCCCCAT CGCGAGGGCC 300
CCTTCCCTCC CCTCCCTGCG GGCGGGCAAT TCAAACCCGA AAGGGCGGGA AGGCGGCGCT 360
CGGGGTTGGC GGGCGGGGGA AAGCGCTGCC GCCAAAAAAC CGCCGCCGTG AGGGGCGGGG 420
CTTGTGCGGT ATGGCCCCGC CCCCTCGCCC ACGTTCCCCG CGCACGAGAC GCGCGCTGTC 480
GCCGCCCACG AGTTCCCCGG GCTGCGCGCG CCTCCCTCTC CCGCCCTCGA CGGCTGCCAT 540
AGCAACGGCG CTGGGCTCCG CCTCCGGAGG GGGTTTGTTT GCGCCATCTG CAGCTGTTGC 600
TCCTGCCTGT CGCGGTGGTG CGGGCTCCGC TGCCCTCCCC GGCTGCGCTC CGGTCCAGCC 660
CTCGCTTCTC GGGGTCGGCG AGCCGGAGCT CCTGCGCGCG CTTCGTTCTT ATACGAACGT 720
CGGGCTCACT CATTTATGTC CTAGAAAAGT TGTGTGGACG ACTGCTTTAA TTTTCATTTT 780
TAGCACTCTA AAGTTTGGGA AGTAATTAAG AACCACCTCA AAATCTGCAG TTTTTTGTTC 840
TTGTTTCTTA 850