Tag | Content |
---|
EnhancerAtlas ID | HS105-07393 |
Organism | Homo sapiens |
Tissue/cell | IMR90 |
Coordinate | chr1:226061480-226061980 |
Target genes | |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Lhx3 | MA0135.1 | chr1:226061496-226061509 | AGCTAATTAATTT | - | 6.15 |
|
| Number of super-enhancer constituents: 8 | ID | Coordinate | Tissue/cell |
SE_04103 | chr1:226060552-226071311 | Brain_Anterior_Caudate | SE_04909 | chr1:226058067-226071472 | Brain_Cingulate_Gyrus | SE_05837 | chr1:226057906-226071834 | Brain_Hippocampus_Middle | SE_06795 | chr1:226060579-226071351 | Brain_Hippocampus_Middle_150 | SE_07978 | chr1:226058042-226071459 | Brain_Inferior_Temporal_Lobe | SE_23251 | chr1:226060678-226062587 | Colon_Crypt_1 | SE_23870 | chr1:226061669-226062501 | Colon_Crypt_2 | SE_25061 | chr1:226060730-226061620 | Colon_Crypt_3 |
|
| Number: 1 | ID | Chromosome | Start | End |
GH01I225873 | chr1 | 226060731 | 226061620 |
|
Enhancer Sequence | CTCAGCCCTG GCCCCAAGCT AATTAATTTC AAAGATGATC ACTTAAAAAT ACTCAAGGTG 60 AGAAAGAAAA TGGGCATCCT CTTCAGAGGA TGACGAAAGC CCTCAGTATC TAAAGCAACC 120 AGTCTGAAGC CAACAAGGTT CATAGCCTTG GCCCAACAGA AGCCCTGAGG GAGCTGAGCA 180 TCTGAGCCTG GGTTTTTGTT TTTGTTTTTT GTTTTGTGAG CACAATGAGG GTAGCGAGGC 240 TGACCTCATG GGTCTGTGGT GAAGAGCAAA GAGAACAGCT ATTGGTACAG GCCAGGTAGA 300 TACACTTAAT GAACACAATC TCATAGCAGT GTCATGTGTG GGTCCTGCCC ACATGGAGGG 360 CTTCATAAGC CCCTAGCCCA TTCCAGGGAC ACACACACAC ACACTATACA CACATATATG 420 CACACACGCA CATATACACA CTCACGCACA TATACACACT CACACGTACG CACACGCATG 480 CTCACAGCCT AGGCGATATG 500
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