EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-05049

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr1:155794660-155795980

Target genes

Number: 31
Name	Ensembl ID

ASH1L	ENSG00000116539
MSTO1	ENSG00000125459
RP11	ENSG00000203761
DAP3	ENSG00000132676
YY1AP1	ENSG00000163374
GON4L	ENSG00000116580
SYT11	ENSG00000132718
RIT1	ENSG00000143622
SNORA42	ENSG00000207475
SCARNA4	ENSG00000252808
KIAA0907	ENSG00000132680
RXFP4	ENSG00000173080
ARHGEF2	ENSG00000116584
SSR2	ENSG00000163479
UBQLN4	ENSG00000160803
LAMTOR2	ENSG00000116586
RAB25	ENSG00000132698
MEX3A	ENSG00000254726
LMNA	ENSG00000160789
SLC25A44	ENSG00000160785
PMF1	ENSG00000160783
BGLAP	ENSG00000242252
PAQR6	ENSG00000160781
SMG5	ENSG00000198952
TMEM79	ENSG00000163472
C1orf85	ENSG00000198715
C1orf182	ENSG00000163467
CCT3	ENSG00000163468
MEF2D	ENSG00000116604
IQGAP3	ENSG00000183856
MRPL24	ENSG00000143314

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nr2f6(var.2)	MA0728.1	chr1:155795617-155795632	GAGGTCAGGAGTTCA	+	6.22
Nr5a2	MA0505.1	chr1:155795928-155795943	GAGGTCAAGGCCACA	+	6.09
Zfx	MA0146.2	chr1:155795123-155795137	GAGGCCGAGGCGGG	-	6.01

Enhancer Sequence

ACCAGGTGAG GAGGCTCATG CCTGTAATCC CAGCACTTTG AGAGATCAAG GAGGGACTGC 60
TCGAGCCCAG AAATACAAAA CCAGCCTGGG CAACATAGTG AAAACCGTCT CTAAAAAAAT 120
AATAATAATA AAATAAAAAT GAAAATTAGC CAGGCATTGT GGCGTGCACC TAGAGTCCGA 180
GTTGCTGGGG AGGCTGAAGT GGGAAGATCA CTTGAACCTA GGAGTTCAAA TTGCAGTGAG 240
CTATGATCAT GGCACTGAAC TTCCAGCCTG GGTGACAGAG CAGTACCTAT CTCTAAAAAA 300
AAAATTAAAG AAAAGAAAAC ATACATAAAC TATTCAAACA ACAGAATGAT ATACAGCAAT 360
AAAAATGAAC AATCTACAAG TACATCCAAG AATATGGATG AATTTCATAA AACAATGTTG 420
AGGCCGGGCA CGGTGGCTCA CGCCTGTAAT CCTAGCACCT TGGGAGGCCG AGGCGGGCAG 480
ATCACCTGAG GTCAGGAGAT CGAGACCAGC CTGGCCAACA TGGTGAAAGC CCGTCTCTAC 540
TAAAAATAAA AAAACTAGCC CTGCATGGTG GCCGTGCCAG TAATCCCAGC TACCCAGGAG 600
GCTGAGGCAG GAGAATCGCT GGAACCCGGA AGGCAGACAC TGCAGTGAGC CGAGATTGCG 660
CTACTGCACT CCAGTCTGGG TGACAGAGCA AGACTCTGTC TCAAAACAAA AAAAAAAAAA 720
ATTGAGAGAA TAAACGCAGT CACAATGCCA GGCACGGTGG CTCACACCTG TCATCCCAAC 780
ACTTTGGGAG GCTGAGGCAA GAGGATCAAT TGAGCACAGC AGTTTGAGAC CAGCCTGGGC 840
AATATAGTGG GGCTCCGTCT CTACAAAAAA AATTTTTTAA TTAGCTGGCT GGGCCGGGTG 900
CGGTGGCTCA TGCCTGTAAT CCCAGCACTT TGGAAAGCCA AGGCAGGCAG ATCACCTGAG 960
GTCAGGAGTT CAAGACCAGC CTGGCCAACA CGGTGAAACC CCGTCTCTAC AAAAAATACA 1020
AAAATTAGCT GGGCATGATG GCAGGTGCCT GTAATCCCAG CTACTAGGGA TGCTGAGGCG 1080
GGAGAATCGC TTGAACCTGG GAGGCGGAGG TTGCAGTGAC CTGAGATCAA GCCATTGCAT 1140
TCCAGCAGCC TGGGCAACAA AGCAAGACTG TGTCTCAAAA AAAAAGAAAA AAAATTAGCT 1200
GGCTGTGACG GCACGCGCTT ATAGTCCCAG CTACTTAGGG CTGAGACAAA AAGATCACTT 1260
TAACCCAGGA GGTCAAGGCC ACAGTAAGCC GTGATGGCAC CACTACACTC CAGTCTGAGT 1320