EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS105-01679

Organism

Homo sapiens

Tissue/cell

IMR90

Coordinate

chr1:28161080-28161420

Target genes

Number: 12
Name	Ensembl ID

RP1	ENSG00000235912
RP11	ENSG00000233975
IFI6	ENSG00000126709
FAM76A	ENSG00000009780
RP3	ENSG00000231344
STX12	ENSG00000117758
PPP1R8	ENSG00000117751
SCARNA1	ENSG00000252947
C1orf38	ENSG00000130775
RPA2	ENSG00000117748
EYA3	ENSG00000158161
RP5	ENSG00000228589

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nr2f6(var.2)	MA0728.1	chr1:28161312-28161327	GAGGTCAGGAGTTCA	+	6.22
Zfx	MA0146.2	chr1:28161288-28161302	GAGGCCGAGGCGGG	-	6.01

Enhancer Sequence

TAGCAGTACT GGCCATAGCT AGTCAAGAAG CTACGGCTTT AGTGACTGTT GAAAGCCAGT 60
GCATTATTTC ATTCACTTGG ACAGAAGCAG CACATTGTTC AACATCTAAC ACATTTCCTT 120
GGTTCTAAGA CATACTGTTT TCTGTTAAAA TTCCATACAT TTTGGCCAGG TGCGGTGGCG 180
GCTCACACCT GGCCTCCCAG CACTTTGGGA GGCCGAGGCG GGCAGATCAC CTGAGGTCAG 240
GAGTTCAAGA CCAGGCTGGC CAGCATGGCA AAACCCCGTC TCTACTAAAA GTAAAAAAAT 300
TAGCCAGGTG CAGTGGCACA CCCCTATAAT CCCAGCTACT 340