Tag | Content |
---|
EnhancerAtlas ID | HS105-00933 |
Organism | Homo sapiens |
Tissue/cell | IMR90 |
Coordinate | chr1:17239920-17241930 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Hnf4a | MA0114.3 | chr1:17239982-17239998 | GAGGTCCAAGTCCAGT | + | 6.07 | KLF5 | MA0599.1 | chr1:17240495-17240505 | GCCCCGCCCC | + | 6.02 |
|
| Number of super-enhancer constituents: 66 | ID | Coordinate | Tissue/cell |
SE_01476 | chr1:17239966-17242069 | Adrenal_Gland | SE_02875 | chr1:17240618-17241434 | Astrocytes | SE_03430 | chr1:17239783-17240499 | Brain_Angular_Gyrus | SE_03430 | chr1:17240731-17242488 | Brain_Angular_Gyrus | SE_04111 | chr1:17237927-17240527 | Brain_Anterior_Caudate | SE_04111 | chr1:17240628-17242448 | Brain_Anterior_Caudate | SE_05172 | chr1:17237770-17246094 | Brain_Cingulate_Gyrus | SE_06210 | chr1:17237645-17245771 | Brain_Hippocampus_Middle | SE_07232 | chr1:17238080-17242647 | Brain_Hippocampus_Middle_150 | SE_08076 | chr1:17237896-17246252 | Brain_Inferior_Temporal_Lobe | SE_08889 | chr1:17239947-17240454 | Brain_Mid_Frontal_Lobe | SE_08889 | chr1:17240789-17242026 | Brain_Mid_Frontal_Lobe | SE_10448 | chr1:17239853-17240476 | CD19_Primary | SE_11024 | chr1:17237883-17245307 | CD20 | SE_12131 | chr1:17240859-17241779 | CD3 | SE_13570 | chr1:17240617-17241484 | CD34_Primary_RO01536 | SE_14531 | chr1:17239563-17241985 | CD4_Memory_Primary_7pool | SE_15440 | chr1:17239829-17241939 | CD4_Memory_Primary_8pool | SE_15839 | chr1:17240568-17241687 | CD4_Naive_Primary_7pool | SE_16401 | chr1:17239578-17241745 | CD4_Naive_Primary_8pool | SE_17223 | chr1:17239936-17240632 | CD4p_CD225int_CD127p_Tmem | SE_17223 | chr1:17240641-17241519 | CD4p_CD225int_CD127p_Tmem | SE_17702 | chr1:17238954-17242280 | CD4p_CD25-_CD45RAp_Naive | SE_18224 | chr1:17239283-17242338 | CD4p_CD25-_CD45ROp_Memory | SE_19865 | chr1:17239824-17242024 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_20182 | chr1:17239788-17241910 | CD56 | SE_20877 | chr1:17239477-17241855 | CD8_Memory_7pool | SE_21501 | chr1:17239632-17241900 | CD8_Naive_7pool | SE_22012 | chr1:17239593-17241877 | CD8_Naive_8pool | SE_22656 | chr1:17239909-17240454 | CD8_primiary | SE_22656 | chr1:17240604-17241913 | CD8_primiary | SE_23911 | chr1:17239885-17240478 | Colon_Crypt_2 | SE_23911 | chr1:17240479-17241564 | Colon_Crypt_2 | SE_25305 | chr1:17239947-17241454 | Colon_Crypt_3 | SE_27153 | chr1:17239835-17242028 | Esophagus | SE_28353 | chr1:17239867-17240494 | Fetal_Intestine | SE_28353 | chr1:17240610-17241704 | Fetal_Intestine | SE_29508 | chr1:17239703-17240542 | Fetal_Intestine_Large | SE_29649 | chr1:17238840-17240515 | Fetal_Muscle | SE_29649 | chr1:17240656-17242112 | Fetal_Muscle | SE_31118 | chr1:17238627-17240491 | Fetal_Thymus | SE_31118 | chr1:17240712-17241947 | Fetal_Thymus | SE_31881 | chr1:17239819-17242135 | Gastric | SE_33013 | chr1:17239950-17240437 | H1 | SE_33013 | chr1:17240620-17241403 | H1 | SE_33540 | chr1:17239257-17245174 | H2171 | SE_35172 | chr1:17239807-17241711 | HeLa | SE_42843 | chr1:17239864-17243201 | Lung | SE_45444 | chr1:17239949-17240367 | NHLF | SE_47744 | chr1:17239961-17240545 | Pancreas | SE_47744 | chr1:17240549-17242006 | Pancreas | SE_51608 | chr1:17238813-17242145 | Skeletal_Muscle | SE_53155 | chr1:17238762-17240528 | Small_Intestine | SE_53155 | chr1:17240572-17241791 | Small_Intestine | SE_53544 | chr1:17238838-17241941 | Spleen | SE_54964 | chr1:17238808-17242458 | Stomach_Smooth_Muscle | SE_55554 | chr1:17240073-17240473 | Thymus | SE_55554 | chr1:17240575-17241458 | Thymus | SE_61917 | chr1:17221528-17256732 | Toledo | SE_63124 | chr1:17215209-17241689 | Tonsil | SE_63250 | chr1:17222916-17254487 | GLC16 | SE_63321 | chr1:17222804-17249569 | NCI-H82 | SE_65449 | chr1:17237943-17242529 | Pancreatic_islets | SE_67642 | chr1:17239816-17240437 | u87 | SE_67642 | chr1:17240556-17241577 | u87 | SE_68996 | chr1:17239943-17241712 | H9 |
|
| Number: 1 | ID | Chromosome | Start | End |
GH01I016912 | chr1 | 17238896 | 17241927 |
|
Enhancer Sequence | AGCAAGACTC CCTCAAAAAA AAAAAAAAGC ATGATTTCAT CCAATGCCTT CAATAACAGA 60 AGGAGGTCCA AGTCCAGTGA GAGGGTGGAA CGAACATACT GTCACAGTGG AAAGGACACG 120 AGACAGGCGC GCCACCGGGT TGAGTCTCGC GAACAAACTG AGGCCAGAGT GCCTTCCCCA 180 GGGCTGCACG TCAGTCAGGA AAAAAAAAAG CATTCTCTCC GACAGGTCAA ATCACCGAAG 240 CCTCGGGATC GTCGCTGGGG GCTGTGACGG GGCTGGCATG AAACGTCCCT CTGTCTGGCT 300 GGGCGATGGG TCAGTGCTCA GGAGTTTCAG GCCTTTAAGG CCCGGCCAGA CCGCAGGGGG 360 ACTCTGCAGC CGGGTCGGGG TTTCGATCCT GCGCTGCGGC CTTGCAACTG CGAGGACTTG 420 GGGGTCGTGC TTCGTTCGCC TGGTATCCTC GTTCGTGCGT GTAGGAGGCG CCTGGCTTGC 480 CGGGCGGTGC CAGGCGGCAA GAGGGAGGGC GCACGGAGCG TGTCCGCCCA GGGCGGCCCC 540 TGTAAGCGCT GCAGAAGCGC TGCTCCCGGC GCCCGGCCCC GCCCCAGCCT CCGCCCCACT 600 ACCGCGCAGC GCAGGCTCCG CCCCCAGTTT TCCCCGCCCC GTGGCGGGGA CGCCCCGCCC 660 GGTCCGGCCC GCTCGGCCTC GGCAGCAGCG GCTGCGGCGA AGGCGCGCGA AGGTAGGTGG 720 CCGGGGGCGC GCGCGTGCGC GGGGGCGGGA CGGACGCGCT CCCGGCGGAG GAGGCCGCGC 780 GCCTGGGGGC GGGCTGGAGC CACGTACCGG GGCTGGGGGC GCTGTGTGTT CCGCGACTGC 840 CGCGGCCCGG CACCGGAGGC CAGGAGAGCG TTCCCAACAG GCTCCGCGGA TGCCCCGCCG 900 CGTCCTGCCG CCCATCCTGC CCGGATTGTC GCGGGCCGGG GGCACGACAG GAGACTGGGG 960 CCTGCAGGGC GCAGCCGTCC CTCCGCCGGC CGGGGTCCCC TCGCTCCGCG GGCGGCCGTG 1020 GGAGGCCCTC GCGACGGCCT CTGCCCCCCG CAGATGCCCT CTGCAGCTCC TGCGTGCGGG 1080 CCCCGCCCTG CACTGCCCTC CTCGTGTGGG ATCCGGTTTC GTCTTCATTG CAGCCCTGCC 1140 GAGTCGGAAG CATCTCCATT GTGCGGATGG GGAAACTGAG GCCCAGAGCG CATAGTTGGG 1200 CTGGCCACGG AGGCAGGGCC GCCGGATGCT GTGCGGGGAT GGGGCCCTGC ACCCCTTGCG 1260 CCTCTCACCA TGCGGCCTCA GGCCTCTGTG CCCGGCAGCG TCTCTGGAGT GGGCATTTTG 1320 AACGAGCTCC CTCCTGATTT TCACACAGAC TTAAGCCTGA CGACCATGCT GGGGCGGATG 1380 TCTGCCCCTC TGGTGACCAG GTCACAGCTC CCTTGGGAAG ACGATTGACT GGGGAATGGG 1440 GACCCTGGGG AGGAGGACTT CAGGGTGCCA TCTGTCTGTT TACGCCAGAA AACAGAGATT 1500 TCTGTTTTCT TTCGCTGGGC TCACAGCAGG TGCTTAATAA ACAGATCTTG TGGCGGGAGC 1560 AGACGACAGC GAGGTTCAGG CAAGACTCCA GGAGTCAACC CCTGGATCTC GGAGGCTCCC 1620 CACCCGCGCA CATTTCCCTG ACTTAACCCT CCCCTCCCCA AGTCTTTCAG CCCTTTCCAC 1680 CCAAGTGGCC CCTGTGGGGG TCACTGCCTG GTTTTCACCC TGATCTTCTG GGATGCGGCA 1740 GATGCTGGCT GGATATGTGT TCGCTGGTGT CCTTCCGTGA TCCCCGTCTG TGGCTGACAC 1800 CATCTGTGGC CCAACATGAC CCCAGCCAGA GCCAAGGGGA ATCATTTCTT TTTCCATTTA 1860 ACATCCTATG TTATTACTTG GCTCTTAGCA TTCATTAATT CATTCAGCAG CTCTTCATGG 1920 AGCTTTGGCC TTAGCCCATG CACTGTGGAA GTGACAGTGA GCTAAGCCAA CCTGGCACTT 1980 TGGGAGGCTG AGGTGGGAGG ACCGCTTGAG 2010
|