EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS101-04299

Organism

Homo sapiens

Tissue/cell

HT29

Coordinate

chr1:234840870-234842850

Target genes

Number: 8
Name	Ensembl ID

RP5	ENSG00000235605
C1orf31	ENSG00000168275
TARBP1	ENSG00000059588
RP4	ENSG00000227630
RP11	ENSG00000238005
TOMM20	ENSG00000173726
RBM34	ENSG00000188739
ARID4B	ENSG00000054267

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

DMRT3	MA0610.1	chr1:234840973-234840984	TTTGATACATT	-	6.02
Gata4	MA0482.1	chr1:234841339-234841350	TCTTATCTCCT	+	6.14
POU4F2	MA0683.1	chr1:234841453-234841469	TTGAATTATTAATGAT	+	6.32

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

SE_42335

chr1:234842475-234843722

Lung

Enhancer Sequence

GGTGGAAAGA GAGGATATTT AAAAAAAGCA AAGACAGTTT TCTTTCCTCT AAGTTGCTAT 60
CTTCGTTAGA GTCAGATTGA GCTGGAAGGT CCCAAGATAG TAATTTGATA CATTTGCTGT 120
TTTAGCTTCC TTCTAGGTCT CTTTATCAGA CACAACAGGG CACCCAATAC ACTCCCCATA 180
AACATGGGAT AAAGCAAGCT TGAGAGTCAT CACTAACCAA GCAAAGGGCA GCATGGTGTG 240
GGCTTCATTA CCAGGTTCAG TAGGCTTTTG CCTATAATCC CAGTTAGATG TTTGACATGG 300
ACCTGGTAGG ACATTTCCTC TGTGTCACCC CTTGTCCTCA GCTCTGCTCT TCCTGGACAC 360
TCACAGCATT TTAAGTTCAC CCTCACCATG TTAAGCACTT GATTATAGTT CATTTAGCAC 420
TTTCATGGTG CTTCCTATGG CATAGTACAG TTATTGATGC TCACACATAT CTTATCTCCT 480
TCTCAAATCA AACCCTAAGT TCATGGAGAG TGAGGTCCAT GACTGGTTCA TCTTTATATT 540
CCCATTATAC TGAACAGATT AGACATTGAA TAAATATTTG TTCTTGAATT ATTAATGATT 600
CACTGTTTCA TGTGTTATTA GACTTCCTTG AACCACAGCT TTCTTATCTA TCAGATGAGG 660
AAGCTGAACT AGATTCTACA AAGTCCTCCT CACTGAAACT TGCGAGTATT TTATGATTCT 720
CCTTCCTGTG CTGACTTCAC GTACACTAGA GGCTCATTCG TAAGTGTGAA GCAATGTCTT 780
TAGCCCTCTG TTAGGATATA GGCATTTAAA ATTTAAAATC TAGATGGGGA GACAGGAATA 840
ACTCACATGA AAATAGCCCA AAATATGACA AGTTATGTAC ACTGAAGTCT GAATTGTGTG 900
ATAGACCCTA GAGATGACAG CACAAGAAGA AAACTGATGC CAGATGTGTA AGTTTGGGTG 960
GTAAACCTTC AGGAAGCCTC TGTTATCACT CAAAACACCC TGGAAAGAAC ATCATTTTAA 1020
ATGGTATCTA ATACAATTTA GCTAATTGGT ATTGAGGGAA AAGAAGAGGG AGGAATCAGA 1080
GATCTAATTT CTTCCTCAAC AGTGAGTAGA AATAGGACTG TTGTGTTTTG TTGGGGGAAT 1140
GGAAAAGGGT TGACCTGGAG AGAGTCAGGG AATGCAGTTG GGTGTCTTGG AGGTCGTGAA 1200
TAGCCTGAAT TGCAAGAAAA TACTGGGCCC TTGTGGGGAC ACAAAAAGGG CCAGGCATGG 1260
GGGAGAAAAG GAGAGTGAGA GGGTACTACT GAGGGCAAAC TTCTGCCTGG CTCTGCTAAG 1320
GAGAAGCCTC ATGGACAAGG CTGGAAAGAG AATGAGGAGT ACTGATTTGC AATGTGGAGC 1380
AATGAAGCGG GCTAGTGTCT TGTCCATGTA AGATGTGTAA GCACTTTTTT TTTTGAGACA 1440
GAATCTCGCT CTGTTGCCCA GACTGGAGTG CAGTGGCGCG ATCTCAGCTC ACTGCAAGCT 1500
CCGCCTCCCA GGTTCACACC ATTCTCCTGC CTCAGCCTCC CAAGTAGCTG GGACTACAGG 1560
CACTTGCCAC CATGCCCAGC TAATTTTTTT TTTTTTGTAT TTTTAGTAGA GACGGGGTTT 1620
CACCGTGTTA GCCAGGATGG TCTCAATCTT CTGACCTCAT GATCTGCCCA CCTCAGCCTC 1680
CCAAAGTGCT GCAGTTACAG GCGTCAGCTA CCGTGCCAGA CCAAGATGTG TAAGCACTTT 1740
CTGTGCCACA GGTCAATGAA ATGAGCATAT GGATATAGAA GGGGTAAGGG AGTCCATTTC 1800
CCTCCACCAG CAGAGTCAAA GGCTTCTATC CCCTCCTTCC TACATATGCT TCCCAAGAGT 1860
GGACTTGAGT AAGCCCCAAG GAAAGCATTT TAGGGTAGGG TGATTATGTG CCCCATGGCT 1920
TCCCGGCCCT GGGAATCTGA GTGAGTGTTC ACTTCCATGT CAGTTTAATC ACATCCAAAC 1980