EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS101-04108

Organism

Homo sapiens

Tissue/cell

HT29

Coordinate

chr1:226371710-226374090

Target genes

Number: 11
Name	Ensembl ID

SRP9	ENSG00000143742
EPHX1	ENSG00000143819
RP11	ENSG00000242861
TMEM63A	ENSG00000196187
PYCR2	ENSG00000143811
C1orf55	ENSG00000143751
H3F3A	ENSG00000163041
ACBD3	ENSG00000182827
MIXL1	ENSG00000185155
LIN9	ENSG00000183814
PARP1	ENSG00000143799

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

SOX10	MA0442.2	chr1:226372405-226372416	TTCTTTGTTTT	-	6.62
Sox3	MA0514.1	chr1:226371906-226371916	AAAACAAAGG	-	6.02
TEAD1	MA0090.2	chr1:226371936-226371946	CACATTCCAT	+	6.02

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

SE_11118

chr1:226371561-226376062

CD20

Enhancer Sequence

TGAAACCTCG TCTCTACGAA AAATACAAAA AATTAGCCGG GCGTGGTGGT GGGCACCTGT 60
AGTCCCAGCT ACTCGGGAGG CTGAGGCAGG AGAATGGAGT GAATCCGGGA GGTGGAGCTT 120
GCAGTGAGCC CCGAGATGGC ACCACTGCAC TCCAGCCTGG GCGACAGAGT GAGACTCTAT 180
CTCAAAAACA AAAAACAAAA CAAAGGCAGC ATTACTTGGC TCACTCCACA TTCCATAATT 240
CTTCTGACTG CTTTTACATC CTTCCCTTTT GTCAGTTAGT GTCTCATATA CTAACAGTCT 300
CCAATGACAC ATGCAGAAAG GTAGCTTTTA ATTGCTACAC AGCTATTTCT CCTTTTTAGT 360
ACCTGGATAT TGCTTTGAGA ACTTCATTTA GGAAGTGAGT GAACCACACC TATCAGTGTA 420
GCTTTATTCT CTAAGGTGAC TAACACCTAG GCCCCAAGTT ATAAGTTTCC CCAGGATTCC 480
TACCACTCAA GACACATGTT AAAATAATCT GTTAGGTTAA GACCACTGAA TCTTAAATCT 540
GAGACATCAT ATTTTATAGA ATCCAGCTCC CTTTATACAT ATGAAACTGA TTCTGGAAAA 600
GTTAATTGTC TAGTTTACAA GGTAACTAGA ATCCAGAGCT TCCTGACTCT CCAAACAATG 660
TTAAGTATAC TACACGTTAC AGTGTTTTAA TCTTTTTCTT TGTTTTGAGA CAGAATTTCA 720
CTTTGTCGCC CAGGATGGAG TGCAGTGGCA TGATCTCGGC TCACTGCAAC CTCTGCCTCC 780
CATATTGAAG CGATTCTTTT TTTTTTTTTA GACGGAGTTT TGCTCGTCGC CCAGGCTGGA 840
GTACAATGGT GCCATCTTGG CTCACTGCAA CCTCCGCCTC CCGGGTTCAA GTGATTCTCC 900
TGCCTCAGCC TCCCTCAGTC CTGCAACAGA GCAGGACTCC AGCTCAAAAA AAAAAAAAAA 960
AAGGAATTAG TTCATTTCTA CTCTTACTCT CTGCTACAAT ATACTTTACT GAAAAATAAG 1020
TTCCAAGAAT AAAAATTTAA GATGGAATGT AGCTATATGA ATTGTACAGA AACCACCTGA 1080
TTTTTATCAA GTGGTAATAT ATCATCACTA CAGCAAACTC TAAATTCAAG CCGGTGATCT 1140
AAAAGTCAAA TGATCCAAAA CCCATTAGCC ATTACCAATT CCCCAAGCTA GTTAGTACAC 1200
AGAGGGCTCA ACTCATTGTG CAATGACCAC GAATATGTCA TTGAATGTGA AATGATCAAA 1260
TGTTCTGGAA AATTTATAAA ACTTTCACTA GTTTGCACAA TTAAAGTTAT TTTGAGAGAA 1320
AACAACTTCC GTGTGTATCA TTACATTGAA CTACTCAACT TTGGCTAGTA AAATATGTAC 1380
TCCAAAAGGT ACTCCCTCTG GGGAAAGTGT CATAAATATG CTGCTCTGGA ATGTACGTGG 1440
AACCTAGCAA CCACTTTTAA AGTTGCATTT GCTGATGTCC CTCCCTGTCC ATTCGCCCTA 1500
CAAGACTAAG TATCTTTAAG AATCAAACTA ACGGGCTTTC ATCAGTTTTT CCCACTGACA 1560
AAAATCATGT GATTGGTCTC TCCACCATTC GACTAAGTGA ATCACCCAAT TAAAAAAAAA 1620
AAAAACCGCA CACTACAATC TTGCTCTAAG ACAAGAGACA TTTAACAATT AATTATGCGA 1680
AAAGCACAGA AGGTACTGTT AGGCCTTACT CTGAGAATTC ACTCTTGCAC ATTGCTTACA 1740
ATGTAAAATT TTAACCACCT AGAAGTTACT AGAACATAGT GGACATCTCT CCTCAAGAGT 1800
TTGACAAGCC GGAGAGGATG ATGAGCTTAA CACTTTACTT CCTCCTCTCT GCCACATCAA 1860
TCTGCCGGGG GATCAAGTCC TGTTCCAGTT TATGGTTCCC AAGAATGGCT GGAAAAGCTA 1920
TGTATGGAAC CTCTTGACAG ATTTCTTCCA CTAAGGGTAA AAATCGGCGG GTTCTGATGT 1980
GACAAGCCAT GGGAAATAGG AAAAGAAAAG CGTCAGTTAA AAAAATAATA ATAATAAAAG 2040
GCAATCCCAG AATGGGATCC TTTGGAAGAA AGTGGGCTCA TTCTTCCACC AGGGCTCCTG 2100
GAAATCCCAG AAGCTAAATC AGGTAAAATG TCCCGGTAAC CTCTGGGAGG CGGGACATGA 2160
CTGCTAAACC AAGGTTGCAG GCCCGTCAGG GGTGTGACCT AGTGGCCAAG CGGGTAGTGA 2220
CAAACTTCGG GTACCCCCAA GGAGGGAACC CCGCTTGAGT CACCACAGCC CAGTATGAGT 2280
GGGTGAGGGC AAGTCTGGTC CAGTCACCCT GGGGACCACA GCCCACGCCG GGCTCCCGGG 2340
GCCGGGCAGA AGCGGCGGGG GTGGGGCTGG CCCGGCTCAC 2380