Tag | Content |
---|
EnhancerAtlas ID | HS101-04094 |
Organism | Homo sapiens |
Tissue/cell | HT29 |
Coordinate | chr1:226051560-226053590 |
Target genes | Number: 15 | Name | Ensembl ID |
|
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
REST | MA0138.2 | chr1:226051949-226051970 | GGCACTGTTCTAGGTGCTGGT | - | 6.46 |
|
| Number of super-enhancer constituents: 13 | ID | Coordinate | Tissue/cell |
SE_04909 | chr1:226038991-226052376 | Brain_Cingulate_Gyrus | SE_04909 | chr1:226052636-226057381 | Brain_Cingulate_Gyrus | SE_05837 | chr1:226052475-226057460 | Brain_Hippocampus_Middle | SE_11743 | chr1:226052861-226055832 | CD20 | SE_23251 | chr1:226052783-226054123 | Colon_Crypt_1 | SE_23870 | chr1:226053260-226054596 | Colon_Crypt_2 | SE_25061 | chr1:226052669-226053145 | Colon_Crypt_3 | SE_28151 | chr1:226051535-226052931 | Fetal_Intestine | SE_29365 | chr1:226051550-226053018 | Fetal_Intestine_Large | SE_31182 | chr1:226053294-226054633 | Fetal_Thymus | SE_31851 | chr1:226053197-226054137 | Gastric | SE_43041 | chr1:226052634-226054560 | Lung | SE_50331 | chr1:226052374-226055060 | Sigmoid_Colon |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH01I225865 | chr1 | 226052915 | 226055046 |
|
Enhancer Sequence | AGCAAGATTG CCCCACTGCA CTCCAGCCTG GGCAACAGAG TGAGACTCCG TCTCAAAAAA 60 AAAAAAAAAA AAAAAAAAAA CCCAGCAAAA TACATACTCA CTATTGACCA GGTATTGTTA 120 CATATATTTA TTTATTTAAT CCTCATCATA ACCTGTGAGG TTTTGTCCCC ATTTTACAGA 180 TGAGTAAACT GAGGCCGACA GAGGTAAGTG GCTTGTGCCC AAGATCACAC AGCTAGTGAG 240 TGTCTGAGCC AGGAGGTGAA TACAGGCAAC CTGGCTCCAA GGTCAATGCT CATGGCCACC 300 ATGCAATACC CCCTCACCAT ACACGCAAAA TTATACATAC AATTCCAGGG GATTCCAGAA 360 CCATGTAAAT CCCCACCTAC CACCTGCCAG GCACTGTTCT AGGTGCTGGT AACAGGGCCT 420 GGATGTGCTT ACATTTTAGT GAGAGAGACA GCCCATAGGT ATATCAATCA TGAAATTAAA 480 CAGTAGGACA ATTTCTGGTC TCAATAAGAG CTGTGAGGAA GAAAACTGCA ATTTAAGCAT 540 CCCTGCTTGA AAGGCAAATT CATACATCAA TCCCCACGGA CTGCAACAGC ATTCACTAAA 600 AAGGCCTCTT AAAATAGGGG AAAGCATGAG TCATGCAATG TTTGTATGAG AATGAGGAGA 660 CTTTTTTTTT CTCTTTAAAG TTATACATTA AGTGGAATTA CTGTTTCCAG GTGTTGCCTA 720 GCAGGCAACT TTGAGGAGTT GCTTCAAGGA AATACAGAAA AATGATTCTG GTATTGAGTA 780 TTTACATATT AGTAAATATT TCTAAAATAC TTAGAGTTTC TGAAGAAGTT TTTCAAATTT 840 TAAACATTCA GTTTACGATC CTGTCTAGCA ATTTGCTTAG CAAGTGCTTT CTTCACAAAT 900 AGTGCAAAGT TAAAGTGCAG CCAACTCCTA GTCCATGCAA CAAATTAGTG GCTGCTGTAT 960 TGATAAGGAA TGAAGAGAGG CCGGGCATGG TGGCTCACGC CTGTAATCCC AGCACTTTGG 1020 GAGGGCAAGG CAGGAGGATC ACTTGAGCCC AGCAATTCGA GACCAGCCTG GGCAACATAG 1080 CAAGACTCTA TCTCCATAAA AAATTTAAAA ATTAGCTGGG TGTGGTGCCA TGTGTCTGCA 1140 GTCCCAGCTA CTTGGGAGGC TGAGGCAGGA AGATGCCTTA AGTCCAGGAG TTGAGGCCGC 1200 AGTAAGCTAT TATTGCACTA CTGAACTCTA GCCTGGGCAA CAGAGCAAGA CCCTGTCTCT 1260 AAAAAAATAA GATTACAAAA AAAGGAATGA AGAAAGAATA AAATGTCAGC TCCTCAGCCC 1320 AGCCTTCAGG TCCTCCAGCA TGGGGTCCTG GGAGCCTTCC CGGACTGCTT GCCCTGCCCC 1380 CCTGCACCCC ACCGCCACCT TTCCTGATGC TCTGGGCCTT TCCCCGCATC CCTGGCTGCA 1440 CACGTAATCT CCTCACAGGA AAGACTTTCC TCCAGCCTCC ATCTGCAGGA ATTGGTGGTG 1500 CAGATACTCA AAGGGAGCCG CTGGAAAGGA GGTTCTACCA GGGAGAGCCT GGACTCAGAC 1560 ACAGTGCTCA CTCAACAGAC ACCCGCTCAG TGGGTGGACA AACGAACAAA CGCAGAGATG 1620 GCCCCGAGGT CCTTCCACCT GTGAGACCCT AGCCCTGTGG GTCCATACAA ATGCTCAGCT 1680 CACGTCTCTC TTATTCTGCA AAGGTGATGC TAAGAACCCC GGGGTCAACA ATTTTTTCCC 1740 CCGTATGCTC TCAAGACGTT TATTCGCACC TACACCCTGG TCTGTGCTCT GGACACTGTG 1800 CACAGGCTGC TTGAAGAGGA TAGGCCACCA GGGCGCTATT CACTGCACAG CACCAGCAGG 1860 GCTGGCACAC AGGAGCCACT CCATACACGT GTGGCAGGGC CAGGTCCTTC TCAGATCTCA 1920 CCTGGATACC CAAGCGAGAG ACAGAAGGCG CTCACCTAAG GTGCTCGCCC TGCGGGTGGG 1980 GCTGTGTTGG TCCTACGTGG AGGGGGCTCA GCTCCCCTCC CACCCCACCT 2030
|