EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS101-04042 
Organism
Homo sapiens 
Tissue/cell
HT29 
Coordinate
chr1:223925780-223928980 
Target genes
TF binding sites/motifs
Number: 6             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
GFI1MA0038.2chr1:223927699-223927711GAAATCACTGCA+6.74
LHX6MA0658.1chr1:223928663-223928673ACTAATTAGC+6.02
Nkx2-5(var.2)MA0503.1chr1:223926788-223926799AGGCACTCAAG+6.14
Nr2f6(var.2)MA0728.1chr1:223927104-223927119TGAACTCCTGACCTC-6.22
RORAMA0071.1chr1:223927759-223927769TGACCTTGAT-6.02
STAT3MA0144.2chr1:223926464-223926475CTTCCCAGAAG-6.14
Number of super-enhancer constituents: 39             
IDCoordinateTissue/cell
SE_00224chr1:223925520-223928901Adipose_Nuclei
SE_01908chr1:223926095-223926935Aorta
SE_01908chr1:223927075-223928148Aorta
SE_09681chr1:223926086-223926867CD14
SE_23408chr1:223925806-223926930Colon_Crypt_1
SE_23408chr1:223927008-223928133Colon_Crypt_1
SE_23408chr1:223928467-223929077Colon_Crypt_1
SE_24051chr1:223926231-223926878Colon_Crypt_2
SE_24051chr1:223927084-223928100Colon_Crypt_2
SE_24051chr1:223928484-223928893Colon_Crypt_2
SE_25230chr1:223926296-223926903Colon_Crypt_3
SE_25230chr1:223927114-223928239Colon_Crypt_3
SE_25230chr1:223928443-223929149Colon_Crypt_3
SE_26209chr1:223926103-223928290Duodenum_Smooth_Muscle
SE_26925chr1:223926095-223928145Esophagus
SE_26925chr1:223928405-223929121Esophagus
SE_31491chr1:223923671-223928232Gastric
SE_31491chr1:223928466-223930048Gastric
SE_33950chr1:223925357-223926983HCC1954
SE_33950chr1:223927048-223928269HCC1954
SE_33950chr1:223928379-223929152HCC1954
SE_34545chr1:223926186-223927072HCT-116
SE_36294chr1:223927044-223927974HMEC
SE_37129chr1:223924560-223926499HSMMtube
SE_37129chr1:223926584-223928521HSMMtube
SE_38254chr1:223928343-223932514HUVEC
SE_41495chr1:223927102-223928062Left_Ventricle
SE_42269chr1:223925796-223927012Lung
SE_42269chr1:223927049-223928176Lung
SE_42269chr1:223928490-223929116Lung
SE_50365chr1:223925795-223926977Sigmoid_Colon
SE_50365chr1:223927008-223928158Sigmoid_Colon
SE_50365chr1:223928472-223929111Sigmoid_Colon
SE_53249chr1:223926157-223926979Small_Intestine
SE_53249chr1:223927086-223928250Small_Intestine
SE_53249chr1:223928478-223929116Small_Intestine
SE_64794chr1:223926064-223928210NHEK
SE_64794chr1:223928353-223929132NHEK
SE_65644chr1:223925909-223927309Pancreatic_islets
Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 2             
ChromosomeStartEnd
chr1223926096223927104
chr1223927976223928193
Number: 1             
IDChromosomeStartEnd
GH01I223736chr1223924574223930136
Enhancer Sequence
TAGCTATGCT TCATATTTAA TTTTTAAATA AACTTATCAG AATCAGCTAA GTTCAAAAAC 60
AATTTTTAAT CTTATTACCT TTTTTTTTCT TTTTTGTGAG ACGGGGTCTT GTTCTGTCAC 120
CCAGGCTGGA GTACAGTGGT ACAATCATAG CTCACTGCAG CCTTGACCTC CCAGGTTCAA 180
AGTGATTCTC CTGCCTCAGC CTCCCAAGTT GCTGGGACGA TAGAAGCATG ACACCACACC 240
TGGCTAATTT TTTAAAAATA ATTTTTATAG AGACAGGGTC TCACAGTATA GTGAGATTTC 300
AGGGTGGTCT TGAAATCCTG AGGGCTCAAG AAATCCTCCA GCCCTGGCCT CCCAAGAGCT 360
AGAATTACAG GCATGAGCCA CCGTACCTAG CCCTATTGCT ATTTTTATTA GCATTACATT 420
AAGTTTATAG GCTAACTTAA GAGGACATGG CATTTTTATG ATAATGAGTT TTTGCAGTCA 480
AGAACGCAGG CCAGTTTTTT TTAAATGGGG TAAATGATTG TCCAAGCGCC TCCAGGCAGG 540
CTCACGTGCA CACTCTGGAG TCAGTGAAGA AGGTGAACAG CTGACAGGAG CAGCCTCCCA 600
GTCAGAGAAG CCCTGCACAC TGTTGCAAAC AGACAGCTTG CATCTGGAGT CTTCTGTGAT 660
CCGAGGAGGA AGCGTGGCTG AGTCCTTCCC AGAAGAGGGT CTGGAGCTGT GAGTTGGGGA 720
CAATTGTCAG ATTCTAGCAG TGAAAGTGGT TCATGTGCAG GTGCAACCTG CCCCGCAGTC 780
ACGGGACACA GCCACATGGA GCCGAGCCAC GCTCTCAGAG AAGGAGCCAG GGAAGAAACA 840
CCCTAACTGC ACTCCTCCCT TCTTCTGGCC CCCAGCAGCC ATAGGCCCTG GGCCCCCGGT 900
GAGATACCCA TAGAGATCAG CTCCCAGGCA GCAGGATGGA GGGTGTAGAC TGGACATGAA 960
GAGGCAGCTG GAATGTATCG GGCACTCAGC TCCAGCTCAC CACGATCCAG GCACTCAAGT 1020
TCCCAAGACA ATAGTTTCTG CTCTCAGATA AATGGAATAA TTAAGGATCA AAAGGTTATC 1080
AACAGGTAAC CAAGCATAAA CAGATTTTTT TTTTTTTTTT TTTTAGACAG AGTCTCACTC 1140
TGTGCCCCAG GCTGGAATGC AGTGGTGCAA TCTGGGCTCA CTGCAACCTC CACCTCCCAG 1200
GTTCAAGTGA TTCTCATGCC TCAGCCTCTC CAGTAGCTGG GACTACAGGC GCGTGCCAAC 1260
ATGCCTGGCT AATTTTTGTA TTTTTAGTAA AGATGGAGTT TCACCATGTT GGCCAGGCTA 1320
GTCTTGAACT CCTGACCTCA TGTGATCTGC CCACCTCGGC CTCCCAAAGT GATGGGATTA 1380
CAGGTGTGAG TCACCATGCC TGGCCCATAA GCAGATTTTG TACCTGAGCA GGAAGGCTAA 1440
GAGCTTGTAA CAACTGAACA TTCCCCCCGG AGAGGAAGGC AGGAGTTTTG CTTGTGCCAA 1500
GTGCACTGTT CAGACAGTCC TCTGAGGTAC ACCAAGGTCT GAGTAGCCAT CCCACCCTCC 1560
CCTCTGCCAA AATTTTTGTG TGACTGGAGA GCAGAGCCCT CCTCCAAAAA TAAAATGAGC 1620
ACAAGGAAAA TACTATTTGC AGATACATAA TATTAAAACC ATAGGTCTTT CTTTTTCTAG 1680
TCCCATCCAT ATGGCAACAT TCCAGGAGAG GCCTCCGTCA CTGGAAGGCA CCCTCAGGGG 1740
CTTTCCTGGA GCTAAAAACA GTTTAAGCCA AAAGTTATTT GTAGCATCTG AGTTAAACTC 1800
TTCGTCTCAC CCTTCTCGAG CTAGCTGGCT TATTTTATCC GGACCAGGAT ATAACAGCTC 1860
TAAACAGGCT TTGCCAGGAA GAGACGTCAT GGACTTCAAC CAGGGCACCT GACCAGGAAG 1920
AAATCACTGC AGGATGATCT GAAAGAGTTT TCATAAATTA TTTTACGTAA GGTAGATTCT 1980
GACCTTGATG GGGACAGCCA AGGTTCTGGA CCCTCAGCTG GGAAAGATGG GACTAAGTCT 2040
ACAACTGCTG AGGTTGTAGA ACAGGCTTCT TGTTGGGAGG AACCCTCTTG TGGACATGGG 2100
CCGTCGAGGT GGAGTGAGAG AACACCGTGC CACCTGGACG CTGAAACACC ATTGAGTCAC 2160
CTCTGTTTGA AATGCTTGTT CCCTGGTGCC GTAAAGAAAT AGCACTTGAA CATAAATTTA 2220
ATTTACTCAG CAAGGACATT TTTATACTTT CTGTGAAAGG GTACACTCAC CAGGAGTTTT 2280
GCCACGAGAG TACACCAAAC AAAGGAGACA GGGTCATTTA TAACCTGACG CGTCCACCCT 2340
ACTGCTGTGT CCAGTTTCCA TTGGCTGGAA CAGGACCTCC CATTCTGTAT TTGTCCCGAT 2400
TGGCTAACAA CTTAGAACTT TTTAAAAGAG GCAAAGGCAG AGGAGAACAA AGGAAGGAGG 2460
AAGTAACTTG TGGAATGCTG AGAAAGGTAA AAACACCTTT AGATAAGGAA GAGGAACAGG 2520
CTATGACCTA ATGCTTGCTT GGACCAGTAT AAGCATGCCA GGGAAAATAC TTAGGCTAAA 2580
TTGTGGGAGC TAAGAACATA AAGTACATTG ATTTCTTTAT CATGGCTAGC AGATATTTAA 2640
GAATGTTAGC ACAGGTCTTT GAATAAATTT TGCTTCTAAG AGAAGTTACT ATTTATTCCT 2700
AATTAAATGG GGAGGAAGGT CTTTGAAGAG AAACCTTTAC ACCTCTTAAG GACAAAAGTC 2760
CCCAAGACCT GTCCAATTTC GAATTCAATT AGGTGAATTC GAAATTGACA CCAGCCTCTT 2820
TGCAGAGGAG ACTGTTTTGG TTATACATCA AAAGCCTGTG CTTTGCAGAT AGACCTGACA 2880
GCCACTAATT AGCTAGGAGC GTTGGGTGAT CCAGTCCACC TCCTTAAACC TCAGTTTCCT 2940
CAACTATGAA ATAGAATGAA AATAGTACCT ACCTTGGAAC TGTTCTGTGA CAAGGAAATG 3000
AGATAACATG ATAATGTGCA TAAGGCTTTT AGCTCGGGGC CTGGCACACC TAAGCCTTTG 3060
TGTAATCATT GTGTAGATCT TGTCACTGAG AACGCTTACA CGAGCAGATA TTAAAATAAA 3120
GGAAAGAAGT CAGTTGGGTA AGGGAGCTTC CCAGCTTGGT TCAAAATATT TTGCTGATTG 3180
GGGTGAGGGA AAGAGTGAAG 3200