Tag | Content |
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EnhancerAtlas ID | HS101-04042 |
Organism | Homo sapiens |
Tissue/cell | HT29 |
Coordinate | chr1:223925780-223928980 |
Target genes | Number: 12 | Name | Ensembl ID |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
GFI1 | MA0038.2 | chr1:223927699-223927711 | GAAATCACTGCA | + | 6.74 | LHX6 | MA0658.1 | chr1:223928663-223928673 | ACTAATTAGC | + | 6.02 | Nkx2-5(var.2) | MA0503.1 | chr1:223926788-223926799 | AGGCACTCAAG | + | 6.14 | Nr2f6(var.2) | MA0728.1 | chr1:223927104-223927119 | TGAACTCCTGACCTC | - | 6.22 | RORA | MA0071.1 | chr1:223927759-223927769 | TGACCTTGAT | - | 6.02 | STAT3 | MA0144.2 | chr1:223926464-223926475 | CTTCCCAGAAG | - | 6.14 |
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| Number of super-enhancer constituents: 39 | ID | Coordinate | Tissue/cell |
SE_00224 | chr1:223925520-223928901 | Adipose_Nuclei | SE_01908 | chr1:223926095-223926935 | Aorta | SE_01908 | chr1:223927075-223928148 | Aorta | SE_09681 | chr1:223926086-223926867 | CD14 | SE_23408 | chr1:223925806-223926930 | Colon_Crypt_1 | SE_23408 | chr1:223927008-223928133 | Colon_Crypt_1 | SE_23408 | chr1:223928467-223929077 | Colon_Crypt_1 | SE_24051 | chr1:223926231-223926878 | Colon_Crypt_2 | SE_24051 | chr1:223927084-223928100 | Colon_Crypt_2 | SE_24051 | chr1:223928484-223928893 | Colon_Crypt_2 | SE_25230 | chr1:223926296-223926903 | Colon_Crypt_3 | SE_25230 | chr1:223927114-223928239 | Colon_Crypt_3 | SE_25230 | chr1:223928443-223929149 | Colon_Crypt_3 | SE_26209 | chr1:223926103-223928290 | Duodenum_Smooth_Muscle | SE_26925 | chr1:223926095-223928145 | Esophagus | SE_26925 | chr1:223928405-223929121 | Esophagus | SE_31491 | chr1:223923671-223928232 | Gastric | SE_31491 | chr1:223928466-223930048 | Gastric | SE_33950 | chr1:223925357-223926983 | HCC1954 | SE_33950 | chr1:223927048-223928269 | HCC1954 | SE_33950 | chr1:223928379-223929152 | HCC1954 | SE_34545 | chr1:223926186-223927072 | HCT-116 | SE_36294 | chr1:223927044-223927974 | HMEC | SE_37129 | chr1:223924560-223926499 | HSMMtube | SE_37129 | chr1:223926584-223928521 | HSMMtube | SE_38254 | chr1:223928343-223932514 | HUVEC | SE_41495 | chr1:223927102-223928062 | Left_Ventricle | SE_42269 | chr1:223925796-223927012 | Lung | SE_42269 | chr1:223927049-223928176 | Lung | SE_42269 | chr1:223928490-223929116 | Lung | SE_50365 | chr1:223925795-223926977 | Sigmoid_Colon | SE_50365 | chr1:223927008-223928158 | Sigmoid_Colon | SE_50365 | chr1:223928472-223929111 | Sigmoid_Colon | SE_53249 | chr1:223926157-223926979 | Small_Intestine | SE_53249 | chr1:223927086-223928250 | Small_Intestine | SE_53249 | chr1:223928478-223929116 | Small_Intestine | SE_64794 | chr1:223926064-223928210 | NHEK | SE_64794 | chr1:223928353-223929132 | NHEK | SE_65644 | chr1:223925909-223927309 | Pancreatic_islets |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr1 | 223926096 | 223927104 | chr1 | 223927976 | 223928193 |
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| Number: 1 | ID | Chromosome | Start | End |
GH01I223736 | chr1 | 223924574 | 223930136 |
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Enhancer Sequence | TAGCTATGCT TCATATTTAA TTTTTAAATA AACTTATCAG AATCAGCTAA GTTCAAAAAC 60 AATTTTTAAT CTTATTACCT TTTTTTTTCT TTTTTGTGAG ACGGGGTCTT GTTCTGTCAC 120 CCAGGCTGGA GTACAGTGGT ACAATCATAG CTCACTGCAG CCTTGACCTC CCAGGTTCAA 180 AGTGATTCTC CTGCCTCAGC CTCCCAAGTT GCTGGGACGA TAGAAGCATG ACACCACACC 240 TGGCTAATTT TTTAAAAATA ATTTTTATAG AGACAGGGTC TCACAGTATA GTGAGATTTC 300 AGGGTGGTCT TGAAATCCTG AGGGCTCAAG AAATCCTCCA GCCCTGGCCT CCCAAGAGCT 360 AGAATTACAG GCATGAGCCA CCGTACCTAG CCCTATTGCT ATTTTTATTA GCATTACATT 420 AAGTTTATAG GCTAACTTAA GAGGACATGG CATTTTTATG ATAATGAGTT TTTGCAGTCA 480 AGAACGCAGG CCAGTTTTTT TTAAATGGGG TAAATGATTG TCCAAGCGCC TCCAGGCAGG 540 CTCACGTGCA CACTCTGGAG TCAGTGAAGA AGGTGAACAG CTGACAGGAG CAGCCTCCCA 600 GTCAGAGAAG CCCTGCACAC TGTTGCAAAC AGACAGCTTG CATCTGGAGT CTTCTGTGAT 660 CCGAGGAGGA AGCGTGGCTG AGTCCTTCCC AGAAGAGGGT CTGGAGCTGT GAGTTGGGGA 720 CAATTGTCAG ATTCTAGCAG TGAAAGTGGT TCATGTGCAG GTGCAACCTG CCCCGCAGTC 780 ACGGGACACA GCCACATGGA GCCGAGCCAC GCTCTCAGAG AAGGAGCCAG GGAAGAAACA 840 CCCTAACTGC ACTCCTCCCT TCTTCTGGCC CCCAGCAGCC ATAGGCCCTG GGCCCCCGGT 900 GAGATACCCA TAGAGATCAG CTCCCAGGCA GCAGGATGGA GGGTGTAGAC TGGACATGAA 960 GAGGCAGCTG GAATGTATCG GGCACTCAGC TCCAGCTCAC CACGATCCAG GCACTCAAGT 1020 TCCCAAGACA ATAGTTTCTG CTCTCAGATA AATGGAATAA TTAAGGATCA AAAGGTTATC 1080 AACAGGTAAC CAAGCATAAA CAGATTTTTT TTTTTTTTTT TTTTAGACAG AGTCTCACTC 1140 TGTGCCCCAG GCTGGAATGC AGTGGTGCAA TCTGGGCTCA CTGCAACCTC CACCTCCCAG 1200 GTTCAAGTGA TTCTCATGCC TCAGCCTCTC CAGTAGCTGG GACTACAGGC GCGTGCCAAC 1260 ATGCCTGGCT AATTTTTGTA TTTTTAGTAA AGATGGAGTT TCACCATGTT GGCCAGGCTA 1320 GTCTTGAACT CCTGACCTCA TGTGATCTGC CCACCTCGGC CTCCCAAAGT GATGGGATTA 1380 CAGGTGTGAG TCACCATGCC TGGCCCATAA GCAGATTTTG TACCTGAGCA GGAAGGCTAA 1440 GAGCTTGTAA CAACTGAACA TTCCCCCCGG AGAGGAAGGC AGGAGTTTTG CTTGTGCCAA 1500 GTGCACTGTT CAGACAGTCC TCTGAGGTAC ACCAAGGTCT GAGTAGCCAT CCCACCCTCC 1560 CCTCTGCCAA AATTTTTGTG TGACTGGAGA GCAGAGCCCT CCTCCAAAAA TAAAATGAGC 1620 ACAAGGAAAA TACTATTTGC AGATACATAA TATTAAAACC ATAGGTCTTT CTTTTTCTAG 1680 TCCCATCCAT ATGGCAACAT TCCAGGAGAG GCCTCCGTCA CTGGAAGGCA CCCTCAGGGG 1740 CTTTCCTGGA GCTAAAAACA GTTTAAGCCA AAAGTTATTT GTAGCATCTG AGTTAAACTC 1800 TTCGTCTCAC CCTTCTCGAG CTAGCTGGCT TATTTTATCC GGACCAGGAT ATAACAGCTC 1860 TAAACAGGCT TTGCCAGGAA GAGACGTCAT GGACTTCAAC CAGGGCACCT GACCAGGAAG 1920 AAATCACTGC AGGATGATCT GAAAGAGTTT TCATAAATTA TTTTACGTAA GGTAGATTCT 1980 GACCTTGATG GGGACAGCCA AGGTTCTGGA CCCTCAGCTG GGAAAGATGG GACTAAGTCT 2040 ACAACTGCTG AGGTTGTAGA ACAGGCTTCT TGTTGGGAGG AACCCTCTTG TGGACATGGG 2100 CCGTCGAGGT GGAGTGAGAG AACACCGTGC CACCTGGACG CTGAAACACC ATTGAGTCAC 2160 CTCTGTTTGA AATGCTTGTT CCCTGGTGCC GTAAAGAAAT AGCACTTGAA CATAAATTTA 2220 ATTTACTCAG CAAGGACATT TTTATACTTT CTGTGAAAGG GTACACTCAC CAGGAGTTTT 2280 GCCACGAGAG TACACCAAAC AAAGGAGACA GGGTCATTTA TAACCTGACG CGTCCACCCT 2340 ACTGCTGTGT CCAGTTTCCA TTGGCTGGAA CAGGACCTCC CATTCTGTAT TTGTCCCGAT 2400 TGGCTAACAA CTTAGAACTT TTTAAAAGAG GCAAAGGCAG AGGAGAACAA AGGAAGGAGG 2460 AAGTAACTTG TGGAATGCTG AGAAAGGTAA AAACACCTTT AGATAAGGAA GAGGAACAGG 2520 CTATGACCTA ATGCTTGCTT GGACCAGTAT AAGCATGCCA GGGAAAATAC TTAGGCTAAA 2580 TTGTGGGAGC TAAGAACATA AAGTACATTG ATTTCTTTAT CATGGCTAGC AGATATTTAA 2640 GAATGTTAGC ACAGGTCTTT GAATAAATTT TGCTTCTAAG AGAAGTTACT ATTTATTCCT 2700 AATTAAATGG GGAGGAAGGT CTTTGAAGAG AAACCTTTAC ACCTCTTAAG GACAAAAGTC 2760 CCCAAGACCT GTCCAATTTC GAATTCAATT AGGTGAATTC GAAATTGACA CCAGCCTCTT 2820 TGCAGAGGAG ACTGTTTTGG TTATACATCA AAAGCCTGTG CTTTGCAGAT AGACCTGACA 2880 GCCACTAATT AGCTAGGAGC GTTGGGTGAT CCAGTCCACC TCCTTAAACC TCAGTTTCCT 2940 CAACTATGAA ATAGAATGAA AATAGTACCT ACCTTGGAAC TGTTCTGTGA CAAGGAAATG 3000 AGATAACATG ATAATGTGCA TAAGGCTTTT AGCTCGGGGC CTGGCACACC TAAGCCTTTG 3060 TGTAATCATT GTGTAGATCT TGTCACTGAG AACGCTTACA CGAGCAGATA TTAAAATAAA 3120 GGAAAGAAGT CAGTTGGGTA AGGGAGCTTC CCAGCTTGGT TCAAAATATT TTGCTGATTG 3180 GGGTGAGGGA AAGAGTGAAG 3200
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