EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS101-03776

Organism

Homo sapiens

Tissue/cell

HT29

Coordinate

chr1:207082170-207082800

Target genes

Number: 11
Name	Ensembl ID

RASSF5	ENSG00000136653
RP11	ENSG00000234981
EIF2D	ENSG00000143486
MAPKAPK2	ENSG00000162889
FAIM3	ENSG00000162894
PIGR	ENSG00000162896
C1orf116	ENSG00000182795
PFKFB2	ENSG00000123836
YOD1	ENSG00000180667
C4BPB	ENSG00000123843
CD55	ENSG00000196352

dbSUPER

Number of super-enhancer constituents: 14
ID	Coordinate	Tissue/cell

SE_10206	chr1:207081958-207084707	CD19_Primary
SE_10930	chr1:207072090-207107411	CD20
SE_16055	chr1:207081985-207083773	CD4_Naive_Primary_7pool
SE_17565	chr1:207075981-207099113	CD4p_CD25-_CD45RAp_Naive
SE_18510	chr1:207081365-207099277	CD4p_CD25-_Il17-_PMAstim_Th
SE_22043	chr1:207081717-207084611	CD8_Naive_8pool
SE_22585	chr1:207081983-207082904	CD8_primiary
SE_34922	chr1:207081822-207084118	HeLa
SE_54379	chr1:207082325-207083986	Spleen
SE_59006	chr1:207077980-207107211	Ly3
SE_61245	chr1:207078603-207107351	HBL1
SE_61484	chr1:207078352-207107363	Toledo
SE_62300	chr1:207078312-207107022	Tonsil
SE_64397	chr1:207081638-207084650	NHEK

Enhancer Sequence

TTTCTCATCT CAATTCTTAA AGATGAACGG ATAAAGGCTT TCTACCCAAC CATCAGTGGC 60
CCTGAGTGGA AACGCGAGTT CCCTCCATCC ACTCTAGATT TAAAGATGAA TCCTCCTCAC 120
TCAAGGTGTT GAACCCTGTC TACATCTCTC CCAAGTCATC CTCTAGCCAA GCTTAACCGC 180
CTCCAGAGAA AGGTAAATTA CCTCCTCTCA TCTTCGAGAG TTTACTAGAA AGTTCTCGCG 240
CACAGGAAGG TGAACTGTCT AGGTAGCTTC CACCTCCCTA GGACCCCCTA GAAATCTAAT 300
CTCCTCCACG AGAAAGCCTT TCACATAACT GTGGAGCTGC CACCTATCAT TCTCTGCTAA 360
GCCAGCTGCA TCCAGCACGC AGGTATCCCG TGACAACTGC TTGGCTAGAA GCCACGGAAC 420
CAGGTCTTCT ACAGTTCCCG GTATTCAACC TCCTGACACC AAACAAGGAG GAAACTAAAA 480
CAACTTGTTC CTCGGCTCAG GGCCCAGGAG CTGCTGGGAA ACCCGCTCTC CGGATCGCGG 540
CGGCGGCGGC GCGGGAAGCC ACACTCGGGT CCCCGCCCAG GGCTGGGGCC GCCCAGTCGG 600
GCCGCGGCTG CCAATCAGGG CAGGAGCGGA 630