EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS101-03643

Organism

Homo sapiens

Tissue/cell

HT29

Coordinate

chr1:202309670-202311020

Target genes

Number: 14
Name	Ensembl ID

TNNT2	ENSG00000118194
TNNI1	ENSG00000159173
PHLDA3	ENSG00000174307
RP11	ENSG00000224536
RPS10P7	ENSG00000223396
NAV1	ENSG00000134369
IPO9	ENSG00000198700
SHISA4	ENSG00000198892
LMOD1	ENSG00000163431
TIMM17A	ENSG00000134375
RNPEP	ENSG00000176393
ELF3	ENSG00000163435
UBE2T	ENSG00000077152
PPP1R12B	ENSG00000077157

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

BCL6B	MA0731.1	chr1:202310309-202310326	GGAATTCCTTGACAGCA	-	6.9
Pou2f3	MA0627.1	chr1:202309732-202309748	TTATATGCAAATACTA	+	6.09
TBX21	MA0690.1	chr1:202310154-202310164	TTCACACCTT	-	6.02
TBX2	MA0688.1	chr1:202310153-202310164	TTTCACACCTT	-	6.62
Zfx	MA0146.2	chr1:202310466-202310480	GAGGCCGAGGCGGG	-	6.01

Enhancer Sequence

CCTGTGCAAC AAAGGATATC CCCATCTCTT AAATATAAAG TATATGGGAG GACATGCATA 60
GGTTATATGC AAATACTACA CCATTTTATA TCTGGGACTT GACCTTTGGT GGATTTGGGA 120
TCTGCAGGAT GTCCTGGAAC CATCCCTCAT GGATACAGAG GGTTGACTGT ACAGTAAAAG 180
TATCACAAGT ATAAAGTATA CCTTTATATA AAATGAGAAC AGTGGAAAGC CATGGTAAAA 240
GGATTAGAAC AAGCAAGACA ATTTCTCCCA AGGAAGCAAC CAGACTCCAG CCTCACTATG 300
TTAACCAAAA TTGGCATATG CCATTCTTTG GCTCAAATGC CATGAATAAC TGCCTATTTT 360
TCAGGGTATA AAGGTTCTTT ACAATCTAAC CCTTATATCC CGCCTTATAT CCAGTATCTA 420
CTCTCCACAA ACTCATGCTT CAGCCACACT GCACTATTCC TGCTGCCCAT AAAAGTTTTA 480
TTCTTTCACA CCTTTAGATA TTAAAGGTTA CATATTAAAT CACAACTCCT TCTCCAGTAA 540
TGCCTCCCCA CCACTCACAC CTTTCCAACG TCACCCTCTG TGCGTCTACA TCTATTTGCA 600
TCGTGTTCTA ATTCACCTGA CAGTTTCTTC TCCTTAGGAG GAATTCCTTG ACAGCAGGTC 660
CCTAGTCTTT TTTTGTATCA AGTCTGCAGT AAATTTGGAT AATTAATGAA CGAAACGTGG 720
GTTTGGACCA GATGTTGAAG AAGACAAAAG AACAGGCCGG GCGCGGTGGC TCACGCCTGT 780
AATCCCAGCA CTTTGGGAGG CCGAGGCGGG CGGATCACGA GGTCAGGAGA TCGAGACCAT 840
CCCGGCTAAA ACGGTGAAAC CCCGTCTCTA CTGAAAATAC AAAAAATTAG CCGGGCGTAG 900
TGGCGGGCGC CTGTAGTCCC AGCTACTTGG GAGGCTGAGG CAGGAGAATG GCGTGAACCC 960
GGGAGGCGGA GCTTGCAGTG AGCCGAGATC CCGCCACTGC ACTCCAGCCT GGGCGACAGA 1020
GCGAGACTCC GTCTCAAAAA AAAAAAAAAA AAAAAAAAAA AAAAGAACAG CCAGTGCACA 1080
ACCCGCAGCA AGTACTGGGC TGTTATGTCC CTTCTAGTGG CAAATTTCTC CCTGCTGTGG 1140
CAGGAGGACG GCTCGGGGGA GCTCTGACCA CGATTTCATG CAAAGATACG GTGAGACCCT 1200
CCGCTCAACA GTGGCTTTTC TAAGGCTCTC CTTTCAGAGG AGACGAAAAC TCCCATATTA 1260
GGCGGAAACA GGACTCCTTC CCCCCAAGAC TCAGTGACCT TCTCCAGTGT ACCTTCTTTC 1320
AGATGGGGAA CCGGAATACT CTCCTTGCTT 1350