EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS101-02984

Organism

Homo sapiens

Tissue/cell

HT29

Coordinate

chr1:161008460-161008660

Target genes

Number: 20
Name	Ensembl ID

RP11	ENSG00000233691
TSTD1	ENSG00000215845
F11R	ENSG00000158769
USF1	ENSG00000158773
ARHGAP30	ENSG00000186517
PVRL4	ENSG00000143217
KLHDC9	ENSG00000162755
NIT1	ENSG00000158793
PFDN2	ENSG00000143256
DEDD	ENSG00000158796
UFC1	ENSG00000143222
USP21	ENSG00000143258
PPOX	ENSG00000143224
B4GALT3	ENSG00000158850
NDUFS2	ENSG00000158864
ADAMTS4	ENSG00000158859
TOMM40L	ENSG00000158882
SDHC	ENSG00000143252
C1orf192	ENSG00000188931
RRM2P2	ENSG00000236484

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF14	MA0740.1	chr1:161008576-161008590	AGCCACGCCCCTTC	+	6.1
SP1	MA0079.4	chr1:161008574-161008589	TCAGCCACGCCCCTT	+	6.04
SP4	MA0685.1	chr1:161008574-161008591	TCAGCCACGCCCCTTCG	+	6.12

dbSUPER

Number of super-enhancer constituents: 3
ID	Coordinate	Tissue/cell

SE_10418	chr1:161007313-161009680	CD19_Primary
SE_11046	chr1:161006519-161024499	CD20
SE_61824	chr1:161004243-161018982	Toledo

Enhancer Sequence

GCGCTGAGGA AGGGGCGCGA CAGCCTTCAG GAAGAGGGGG CCTAGGAGTC ACGGCCGCCA 60
TGGCATCCCC TCACCTGGCA GCGCCCCTCC CGGTAGGGTG TGCACGAAGA CCCCTCAGCC 120
ACGCCCCTTC GCTCCGCCAC CCCACTCCCT GCCACGCCTC AACCCAGAGG ACCAAGAGAA 180
CCGCGGCCCC AGGAATCCCC 200