EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS101-02875

Organism

Homo sapiens

Tissue/cell

HT29

Coordinate

chr1:156010380-156010960

Target genes

Number: 29
Name	Ensembl ID

MSTO1	ENSG00000125459
RP11	ENSG00000203761
DAP3	ENSG00000132676
YY1AP1	ENSG00000163374
GON4L	ENSG00000116580
RIT1	ENSG00000143622
KIAA0907	ENSG00000132680
RXFP4	ENSG00000173080
ARHGEF2	ENSG00000116584
SSR2	ENSG00000163479
UBQLN4	ENSG00000160803
LAMTOR2	ENSG00000116586
RAB25	ENSG00000132698
MEX3A	ENSG00000254726
LMNA	ENSG00000160789
SEMA4A	ENSG00000196189
SLC25A44	ENSG00000160785
PMF1	ENSG00000160783
BGLAP	ENSG00000242252
PAQR6	ENSG00000160781
SMG5	ENSG00000198952
TMEM79	ENSG00000163472
C1orf85	ENSG00000198715
C1orf182	ENSG00000163467
CCT3	ENSG00000163468
MEF2D	ENSG00000116604
APOA1BP	ENSG00000163382
BCAN	ENSG00000132692
ISG20L2	ENSG00000143319

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

FOS	MA0476.1	chr1:156010654-156010665	GATGAGTCACA	-	6.14
JUND	MA0491.1	chr1:156010654-156010665	GATGAGTCACA	-	6.14
Nr5a2	MA0505.1	chr1:156010727-156010742	CCTGGCCTTGACTTT	-	6.14

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I156040

chr1

156010581

156010710

Enhancer Sequence

CACCTGCCAC CACGCCTGGC TAATTTTTTT TTTTTGTATT TTTTAGTAGA GATGGGGTTT 60
CACCGTGTTA GCCAGGATGG TCTCGATCTT CTGACCTCGT GATCCGCCCG CCTCAGCCTC 120
CCAAAGTGCT GGGATTACAG GCGTGAGCCA CCGCGCCCAG CCAGTCCACA GAATTTAACT 180
TGGGTTGCAC CTGGACTGGA CACCACCTAG TTTAGCTCTC TCGTGCCTTG CACAAAGCTG 240
GGTAAACATA CATTTTGGTT GAATGGCTTT TCCAGATGAG TCACAGAGGT CAGAGAAAGG 300
TTAAGAGGCT CACTCGAGGT AGGTCATCCC TGCCCCTCCT GCCAGCCCCT GGCCTTGACT 360
TTCCCAGGGC TTTGGTTACC TCGCAGAATC CCCCTCCCCA GAGTCTCAGA GATGGGGGCT 420
GCTTTAATTA TCAAAAGGAT CCTTTGATAT AAGCAGAAAT GGTATAGTGT AAATTCTGGA 480
GGTGGAATGC CTGGGTTTGA GTCTTGGCTT CATTATCTAC TAGCTATGTA AGTGAGTAAG 540
CCACTTAACC TTTCCGGGCC TCAGTTTTCC CCATCTTTAA 580