Tag | Content |
---|
EnhancerAtlas ID | HS101-02521 |
Organism | Homo sapiens |
Tissue/cell | HT29 |
Coordinate | chr1:144929090-144930580 |
Target genes | Number: 22 | Name | Ensembl ID |
|
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Arid3b | MA0601.1 | chr1:144930019-144930030 | CTAATTAATAT | - | 6.02 | IRF1 | MA0050.2 | chr1:144929296-144929317 | AAAGAAAAAGCAAAAGAAAAG | - | 6.15 | NFIL3 | MA0025.1 | chr1:144929113-144929124 | TTATGTAACGT | + | 6.32 | RFX2 | MA0600.2 | chr1:144929714-144929730 | TGTTGCTATAGAAACA | + | 6.13 | RFX2 | MA0600.2 | chr1:144929714-144929730 | TGTTGCTATAGAAACA | - | 6.1 | RFX5 | MA0510.2 | chr1:144929714-144929730 | TGTTGCTATAGAAACA | - | 6.15 | RFX5 | MA0510.2 | chr1:144929714-144929730 | TGTTGCTATAGAAACA | + | 6.16 |
|
| Number of super-enhancer constituents: 22 | ID | Coordinate | Tissue/cell |
SE_00089 | chr1:144920722-144935091 | Adipose_Nuclei | SE_02777 | chr1:144928561-144933593 | Astrocytes | SE_03153 | chr1:144929095-144933474 | Brain_Angular_Gyrus | SE_04539 | chr1:144925659-144934489 | Brain_Anterior_Caudate | SE_07393 | chr1:144926819-144933846 | Brain_Hippocampus_Middle_150 | SE_07793 | chr1:144927003-144934899 | Brain_Inferior_Temporal_Lobe | SE_18717 | chr1:144921453-144938014 | CD4p_CD25-_Il17-_PMAstim_Th | SE_25738 | chr1:144924693-144933482 | DND41 | SE_26266 | chr1:144920766-144933796 | Duodenum_Smooth_Muscle | SE_27974 | chr1:144929716-144933812 | Fetal_Intestine | SE_28939 | chr1:144929130-144933757 | Fetal_Intestine_Large | SE_38811 | chr1:144927061-144933285 | HUVEC | SE_40587 | chr1:144930291-144934050 | Left_Ventricle | SE_42105 | chr1:144930261-144934041 | Lung | SE_45013 | chr1:144926640-144933471 | NHLF | SE_45547 | chr1:144921475-144934798 | Osteoblasts | SE_48047 | chr1:144930173-144934034 | Psoas_Muscle | SE_51073 | chr1:144925786-144934585 | Skeletal_Muscle | SE_55722 | chr1:144923321-144933760 | u87 | SE_63039 | chr1:144924738-144942083 | Tonsil | SE_63706 | chr1:144929163-144933352 | HSMM | SE_64855 | chr1:144928560-144933682 | NHEK |
|
| Number: 1 | ID | Chromosome | Start | End |
GH01I120551 | chr1 | 144925161 | 144933968 |
|
Enhancer Sequence | TTTGGCTGTT ATTTTCTCAG TCTTTATGTA ACGTTCTACA ATATTGGTCA TATTTGGTGG 60 CGGGCTGGGG GGACGAGTTT ATTTCCCATC CATCCTGGCC CAACTAATTT TAGACCCTAA 120 TATGAAAACA CCATGTTTAA TTTGTAACAC CTATGTCTAG TCACAGAAAT ACTGTAAAGC 180 CCAAATTTAG CTGCGAGGCT CCACTGAAAG AAAAAGCAAA AGAAAAGAAG TACACAGTGT 240 TAAGCATACA GTGCTTAACA TTTTATACAA AATGAAAATG CACTGACTTT TTACCTTTCA 300 TGACACTTTC ATCTATGCTG TTTCTCATCT ATGCTGCTTC TCATAATTTT GTGTAAATTT 360 AAAAACTTTT CTCCTGTTTT CTGCTTAGGT TCTTATTGTG ATAGACAGTA TACATACCAT 420 AGAACTACTT TCCAAAAATT TCAAGTGGCC ATCAACAATG TCACTTATCA AGCTCTAAAT 480 TTCTGGAATG ACGTTGACCA GTAGCAGGCT TTCTAAAAAA TGCCTTCTAG ATCACATCTA 540 CCTTTGTGAC AGTATTGTTA AATAAGTTGT ATCAAGTGGA ACATGCCAGA ATGTTTCACA 600 AAGTTTATTG AAGCTAGCAT TTACTGTTGC TATAGAAACA AACTACCATA GTTGAATTTA 660 AAAGGTTGGT ACAGAATCAA TTGGGCAGAC ACGAATAGCT CAAATTAAGC AATTAAGAAT 720 TCAAGACTAT AATGAATGAA ACTCTCCTCT GATCCAATAA TGGGTTAATC CTTTCTTAAT 780 ATCAAATATC TTCCAGTAGA ACTCAGTAGA GTTCTGGCTG TGAACAGTTT ATGCCTTAAT 840 CTTTTGACTG ACAATACTGT ACTTGAATAC TTGAATTCCT GTCTCTTTTA TGAATGAGTC 900 ATCACTAATC CTCAAATGAA CTATTAATTC TAATTAATAT GGTCCAGATG TTATAATACT 960 TTACTGGTGG ATTAATAGGC TTTCCCCAAA CCTTTTACCT TATGCTCTAA TCATTTACAG 1020 GCATTTTGCG GATGAAGGCT TTAATGCTCC AGGAAGAACT AACTAGAGAA CTAACTGCCT 1080 TACAGAAAAC CATTGGGAGG AAACGTCTAT AAATCTGAAA ACAAGAACAA ATTTTAAAAG 1140 TTGGAAAAAA AAAAGAGGTA AGAGGAAAAG TTCTAGTGCC AGAAATGAGA TTAAATGTCT 1200 TCTTTTTATA GGAAAAAAGT GAAGTAGGAA TCTTTACCTT TTTGTTTTAA AAGGTATACA 1260 ATTTTGATAA TGGGAAAGTC AACAGATTTT ACAAAAAGGA TTGTGAAAAT CAAATTATCT 1320 GAGTGCAAAT CACGTTTACT AAATGAGACA GAGCAAAAGG TGCAGCAAAA ATGGGGTCAT 1380 GACTAATTTT CTCAAGTCCA GAATATTTCT AACCTCCACC TAGACCGAAA TCACGTGAAG 1440 CCAGAGGCCA GCTAGCTATA ATCAGAAAGG CACTATGTAG CCGTTTTGTA 1490
|