EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS101-01602

Organism

Homo sapiens

Tissue/cell

HT29

Coordinate

chr1:54163130-54164700

Target genes

Number: 6
Name	Ensembl ID

MAGOH	ENSG00000162385
RP4	ENSG00000228838
LRP8	ENSG00000157193
RP1	ENSG00000219102
TMEM59	ENSG00000116209
TCEANC2	ENSG00000116205

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RORA(var.2)	MA0072.1	chr1:54164495-54164509	TTGACCTAGATTAT	-	6.07
RREB1	MA0073.1	chr1:54163742-54163762	CCCCACCCCACCCACCCCAA	+	7.27

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I053697

chr1

54163341

54164209

Enhancer Sequence

TCCCACCCTC CTCTGGGGGC CACTGTCTGT TCTGGGGCCT CCCCTTACCC AGGCTGTGAA 60
CATTCCTGGG ACAGGTTCAG GATGTGATCC ACCCCCAGCA GAGATCCAAC CCCTGCTCAG 120
GGCTCGAGAA GCATCCATGG AGCTAAACTA CACAGCAGAG GAGGAAGGAG AAACAGCTCT 180
TCTGGAAGGA CCTACCCATC CATCACACTC CTTCCACAGT CCAGCTAACA CTTATTTAGC 240
ATATACTCGG TGCGGACACT GTCCTAAACA CTTTTGCACG TATTGCCTCA CTTCATCCTA 300
GCAACAACCT AGGAGGTAAG TGCTACTACA CTTTTACTGA TTATTTTACA GATGAGGGAA 360
CAGAGGCACA GAGAGGTTAA GCAACTTGCT AAAGTCACAG AGCCCATAAG AGGTGGAACT 420
GGGCTCAGAG CCAGTGGTTC TAACCGCTAC AACGAACACT CTATGTAAAA TACAAGGACG 480
TGTATTGGGA TGGGGACAGA GCAGGGTTAT TCTAGCAACC AAAGCCCTCA CGTTTGAAAA 540
CCTCCCTGTC TCCACATCCG TTTCCTGACA TCTGCCCTCT TCTGTGCTGC CCAGGCCAAC 600
ATTCCGAGGA CTCCCCACCC CACCCACCCC AATGCCCCAG ACCAGACAGC AAACAAACAG 660
GAAACAATTA AAGAACCAAC CAGAAAGTCT CATAAACTCT CCCAGGAACA CGCCCTCCCA 720
GCTTCAGTGC GAGATGTCAG AGCTGGGGAA GGACCTTAGG CCACAGCTCT GAAGACAAAT 780
GCAACAGGCA ACATCCCCTC GGAACGCACT CCAGAGGATG ACGCAGAAGG AGTTCCAGGC 840
AGTGATTTTC CACCTGGAAG ACTTCCGAGT CCCTGATGTC AAGGAACAGG AACAGGAGCC 900
AACTCGAGCC TCTGCTTCTA CATCCCCTCA CCCTCCCCAG AAGGCAGCTT TTGACTGCAG 960
CCTTCCCTGT AACCCATGGT TCTCTCACTT AGGGTCCAAA AAGCTGTGAG GAAGACTGGC 1020
TGCCCTGCCT AGTCAGCAGG TCATCTTCCT GGTCTGCCTT CCAAGCACGC GCCACTGCTT 1080
GTGGGCACTG GCCCCATTTC CCCATCAGGG GTGAGATATT TGTGAGCACA GAACACCAGC 1140
CCTTGGCCAA GCCAGGGACC TCTGTTCAGC CCTGCCACCT GGGTCCGGGT AGACCGAGGC 1200
TGCTGCCAGA AGAGAGCCAC TTCCTGAAAG GTCCATGGGC AGAGCTTCCA GCCAGGGATG 1260
CCCTCCAGAC CTGCAGCCAC CTCTCCACCA GGCTTTCCCT GTGTTTCCCT GCCATAAAAA 1320
CTCAGCCACT TCCACAAGCA TGCCATTTCA TGGTTTACGA GCCCATTGAC CTAGATTATC 1380
TCATCTGACC CTCATCACGA ACCTGTGCGG GCAGCACCAA ACCCCACTGA GGAAATGGGA 1440
TTGGAGACTG AAGTGACTTG CCCAAGGTCC CACAACTAAT AATGACCATC AGAGTCATAA 1500
AAGGAGCCAC CCAAGAGTAA CAGTGCATGC CACACACTGC ACTGTGCTAT GAGTTTTACA 1560
GCCATGATTG 1570