EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS101-01429

Organism

Homo sapiens

Tissue/cell

HT29

Coordinate

chr1:45268830-45268930

Target genes

Number: 12
Name	Ensembl ID

RNF220	ENSG00000187147
TMEM53	ENSG00000126106
C1orf228	ENSG00000198520
KIF2C	ENSG00000142945
RPS8	ENSG00000142937
RP11	ENSG00000225721
PLK3	ENSG00000173846
TCTEX1D4	ENSG00000188396
BTBD19	ENSG00000222009
PTCH2	ENSG00000117425
EIF2B3	ENSG00000070785
UROD	ENSG00000126088

Number of super-enhancer constituents: 21
ID	Coordinate	Tissue/cell

SE_01008	chr1:45267899-45268987	Adrenal_Gland
SE_01831	chr1:45267054-45278224	Aorta
SE_03831	chr1:45267567-45269331	Brain_Angular_Gyrus
SE_04529	chr1:45267157-45270277	Brain_Anterior_Caudate
SE_06454	chr1:45263798-45280273	Brain_Hippocampus_Middle
SE_13535	chr1:45268893-45269614	CD34_Primary_RO01536
SE_16953	chr1:45267025-45269626	CD4p_CD225int_CD127p_Tmem
SE_26084	chr1:45267146-45270191	Duodenum_Smooth_Muscle
SE_26880	chr1:45267071-45270568	Esophagus
SE_29688	chr1:45267031-45270060	Fetal_Muscle
SE_31689	chr1:45267126-45269239	Gastric
SE_34847	chr1:45264794-45276751	HeLa
SE_37253	chr1:45264597-45278304	HSMMtube
SE_41008	chr1:45267023-45270544	Left_Ventricle
SE_42249	chr1:45267046-45270620	Lung
SE_44852	chr1:45267561-45270134	NHLF
SE_46263	chr1:45267271-45270302	Osteoblasts
SE_50290	chr1:45267058-45270081	Sigmoid_Colon
SE_52471	chr1:45267106-45270278	Small_Intestine
SE_53432	chr1:45267069-45268896	Spleen
SE_65466	chr1:45264359-45276830	Pancreatic_islets

Enhancer Sequence

TGGCTCCCCA GACCTCTAAG TCCATCTGTG TATTCCCAGG GATTGAAAGG GGGCAGGTGA 60
CAGGACCCCT GGAGCCTCTC TTCTCTGTTC ACATGGTTCC 100