EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS101-01364

Organism

Homo sapiens

Tissue/cell

HT29

Coordinate

chr1:43825490-43825630

Target genes

Number: 31
Name	Ensembl ID

RIMKLA	ENSG00000177181
CCDC30	ENSG00000186409
PPIH	ENSG00000171960
RP5	ENSG00000234917
LEPRE1	ENSG00000117385
C1orf50	ENSG00000164008
ERMAP	ENSG00000164010
CCDC23	ENSG00000177868
RP11	ENSG00000228192
ZNF691	ENSG00000164011
ATP6V1E1P1	ENSG00000225099
SLC2A1	ENSG00000117394
FAM183A	ENSG00000186973
WDR65	ENSG00000243710
EBNA1BP2	ENSG00000117395
TMEM125	ENSG00000179178
C1orf210	ENSG00000253313
MPL	ENSG00000117400
CDC20	ENSG00000117399
ELOVL1	ENSG00000066322
RP1	ENSG00000229431
MED8	ENSG00000159479
SZT2	ENSG00000198198
HYI	ENSG00000178922
PTPRF	ENSG00000142949
KDM4A	ENSG00000066135
ST3GAL3	ENSG00000126091
IPO13	ENSG00000117408
DPH2	ENSG00000132768
ATP6V0B	ENSG00000117410
B4GALT2	ENSG00000117411

dbSUPER

Number of super-enhancer constituents: 6
ID	Coordinate	Tissue/cell

SE_23264	chr1:43823493-43827031	Colon_Crypt_1
SE_23848	chr1:43824527-43825694	Colon_Crypt_2
SE_24762	chr1:43823482-43826203	Colon_Crypt_3
SE_31866	chr1:43823486-43825843	Gastric
SE_34471	chr1:43823189-43827267	HCT-116
SE_35010	chr1:43823254-43827460	HeLa

Enhancer Sequence

GGGTAAGACC CGAAGTTCCT GGTTCCTGGA GGGAGGTGTC AGTTCATCTC CAGGGCTGAG 60
CACAGATATC TGTCTCCTCT TCCTATCTAA GATTGAGGGC AAGGGAGGTG TTGATTTTCC 120
CAGCGTCTAG ACTCACTCCG 140