Tag | Content |
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EnhancerAtlas ID | HS101-01234 |
Organism | Homo sapiens |
Tissue/cell | HT29 |
Coordinate | chr1:39608180-39608910 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Foxd3 | MA0041.1 | chr1:39608709-39608721 | AAACAAACATTT | - | 6.27 | RORA(var.2) | MA0072.1 | chr1:39608627-39608641 | CTGACCTACTTTTC | - | 6.66 |
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| Number of super-enhancer constituents: 13 | ID | Coordinate | Tissue/cell |
SE_00416 | chr1:39607432-39609721 | Adipose_Nuclei | SE_02052 | chr1:39608108-39608826 | Aorta | SE_25799 | chr1:39606480-39609540 | Duodenum_Smooth_Muscle | SE_32006 | chr1:39608179-39608893 | Gastric | SE_35822 | chr1:39605780-39609757 | HMEC | SE_36947 | chr1:39605532-39611756 | HSMMtube | SE_42256 | chr1:39607415-39608945 | Lung | SE_45768 | chr1:39607341-39608639 | Osteoblasts | SE_47164 | chr1:39606982-39608398 | Panc1 | SE_51765 | chr1:39606612-39609191 | Skeletal_Muscle_Myoblast | SE_54583 | chr1:39606659-39609601 | Stomach_Smooth_Muscle | SE_63563 | chr1:39606612-39609205 | HSMM | SE_64261 | chr1:39605649-39609602 | NHEK |
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| Number: 1 | ID | Chromosome | Start | End |
GH01I039139 | chr1 | 39605512 | 39609683 |
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Enhancer Sequence | TTATTTTTGG GTGCCCTGAA GAAAATATTT GGGGGAAGGA GTGGGGAGAA GCTCAGGCAG 60 CTCCATTTAT GGTTGAGCAA TGCTTGGTAT TCTACAGAAG GGACCATATG GACAGTGGAA 120 GAGAGTTTAG CATTCTGATT GTTCACCTCT TGCTCCTTCC ATTCTGATGG CTAATTAGGG 180 ACACCTCATT AGCTATCAGA GTGGAACAAG TATTTGCCAG GCTGACATGA GCCTCAGCCC 240 TGCATCCTGC ATCTTCTGCT TTCCCAACCT GCTGAGTCAC CACCTAGGAA TGGCAGTAGC 300 CAGGTTACCA CCTGGAGCAC CTGGAGCACT CTTGGCATAA TGCACTGTTG ACTGGTTTTG 360 GTCTCCTAGA CACAGCTTGG GCCTCTCCAA GCCTGTTGGA GTGATAGGCT GGGTCTTAGC 420 TCTCCTTCCA GCTTGTTCCA CAAGGCGCTG ACCTACTTTT CAGGGACAAT TAAGTGTTTG 480 TGAGCAAAGG AAGGCGGTGA CCCGAGTGAA GGTGAACCAG AGCTGCATTA AACAAACATT 540 TGGAGTCACT TTTTCTATCT TACACAGGAG GGCCCATCTC AGTCCAAATG GAATGGCAGA 600 TCAGGCTGAT TGTGGTAGCC ACATTCTAGA TGCTTATCAA GATAGTCAAC TAACCCTTGA 660 ATTTTTATTC TTTCTATCAA TGTACCTTAA TATCAGAAGT TACTTTTCAT AATCATTGTA 720 CCCCTTGTCT 730
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