EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS101-01184

Organism

Homo sapiens

Tissue/cell

HT29

Coordinate

chr1:37948140-37948330

Target genes

Number: 15
Name	Ensembl ID

RP11	ENSG00000233621
ZC3H12A	ENSG00000163874
MEAF6	ENSG00000163875
FTH1P1	ENSG00000232273
SNIP1	ENSG00000163877
RP3	ENSG00000237749
DNALI1	ENSG00000163879
GNL2	ENSG00000134697
RSPO1	ENSG00000169218
CDCA8	ENSG00000134690
EPHA10	ENSG00000183317
MANEAL	ENSG00000185090
C1orf122	ENSG00000197982
YRDC	ENSG00000196449
SF3A3	ENSG00000183431

dbSUPER

Number of super-enhancer constituents: 16
ID	Coordinate	Tissue/cell

SE_00995	chr1:37938982-37953203	Adrenal_Gland
SE_01903	chr1:37948265-37953245	Aorta
SE_11493	chr1:37938939-37953541	CD20
SE_17494	chr1:37937374-37948402	CD4p_CD25-_CD45RAp_Naive
SE_17864	chr1:37936810-37948825	CD4p_CD25-_CD45ROp_Memory
SE_18659	chr1:37937079-37948798	CD4p_CD25-_Il17-_PMAstim_Th
SE_19263	chr1:37938768-37948200	CD4p_CD25-_Il17p_PMAstim_Th17
SE_22516	chr1:37940241-37948736	CD8_primiary
SE_31547	chr1:37938860-37953351	Gastric
SE_34808	chr1:37936154-37948891	HeLa
SE_41638	chr1:37947973-37951816	LNCaP
SE_42562	chr1:37938719-37953498	Lung
SE_50165	chr1:37938796-37948704	Sigmoid_Colon
SE_54020	chr1:37947718-37948497	Spleen
SE_62625	chr1:37936685-37953308	Tonsil
SE_65323	chr1:37939205-37953672	Pancreatic_islets

Enhancer Sequence

GGTATGGAAC CCAGCCTGCC CTCCCCGGCC CTCCTCACTC CTGCCCTTCC TCTCACCTGT 60
CTGCCTGTGC CCTGTTTTCC TCTTGGGGAC CTCCACCATT GGACCACCCA ACCCCGTTTC 120
CTGTGCCACC CCTTCCCTGC TCTCATCCCT GGTTCTGAAG TGCCCCTGCT TAGAGTCCCT 180
CTTGATTCCT 190