EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS101-01106

Organism

Homo sapiens

Tissue/cell

HT29

Coordinate

chr1:33359230-33359360

Target genes

Number: 18
Name	Ensembl ID

HDAC1	ENSG00000116478
MARCKSL1	ENSG00000175130
ZBTB8A	ENSG00000160062
ZBTB8OS	ENSG00000176261
RBBP4	ENSG00000162521
SYNC	ENSG00000162520
KIAA1522	ENSG00000162522
S100PBP	ENSG00000116497
YARS	ENSG00000134684
FNDC5	ENSG00000160097
HPCA	ENSG00000121905
TMEM54	ENSG00000121900
RNF19B	ENSG00000116514
RP1	ENSG00000236065
AK2	ENSG00000004455
TRIM62	ENSG00000116525
ZNF362	ENSG00000160094
PHC2	ENSG00000134686

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EWSR1-FLI1	MA0149.1	chr1:33359283-33359301	CCTCCCTGCCTCCCTTTC	-	6.29
EWSR1-FLI1	MA0149.1	chr1:33359270-33359288	CTTTCCCTCCCTCCCTCC	-	6.31
ZNF263	MA0528.1	chr1:33359293-33359314	TCCCTTTCCCGCTCCGCCTCC	-	6.04
ZNF263	MA0528.1	chr1:33359275-33359296	CCTCCCTCCCTCCCTGCCTCC	-	6.14
ZNF263	MA0528.1	chr1:33359278-33359299	CCCTCCCTCCCTGCCTCCCTT	-	6.16
ZNF263	MA0528.1	chr1:33359274-33359295	CCCTCCCTCCCTCCCTGCCTC	-	6.82

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

SE_23323	chr1:33358681-33360216	Colon_Crypt_1
SE_33675	chr1:33357781-33361490	H2171

Enhancer Sequence

GTGAGGGGCA GGGGCGGGAC GGGGTGGACG GGGCGGGCGC CTTTCCCTCC CTCCCTCCCT 60
GCCTCCCTTT CCCGCTCCGC CTCCCCTCGC TAGGCTGCCG CCTCCTCCCC CATCACCGCT 120
CCCCTCGCCC 130