EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS101-01073

Organism

Homo sapiens

Tissue/cell

HT29

Coordinate

chr1:32650640-32652750

Target genes

Number: 22
Name	Ensembl ID

TINAGL1	ENSG00000142910
PEF1	ENSG00000162517
PTP4A2	ENSG00000184007
KHDRBS1	ENSG00000121774
TMEM39B	ENSG00000121775
RP11	ENSG00000203325
KPNA6	ENSG00000025800
RP4	ENSG00000250135
TXLNA	ENSG00000084652
CCDC28B	ENSG00000160050
IQCC	ENSG00000160051
DCDC2B	ENSG00000222046
EIF3I	ENSG00000084623
TMEM234	ENSG00000160055
MTMR9LP	ENSG00000220785
FAM167B	ENSG00000183615
LCK	ENSG00000182866
HDAC1	ENSG00000116478
MARCKSL1	ENSG00000175130
TSSK3	ENSG00000162526
BSDC1	ENSG00000160058
YARS	ENSG00000134684

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nr2f6(var.2)	MA0728.1	chr1:32652721-32652736	TGAACTCCTGACCTC	-	6.22
Nr2f6(var.2)	MA0728.1	chr1:32651221-32651236	CGATCTCTTGACCTC	-	6
SOX10	MA0442.2	chr1:32652506-32652517	AAAACAAAGAA	+	6.62
Zfx	MA0146.2	chr1:32651244-32651258	CCCGCCTCGGCCTC	+	6.01

Enhancer Sequence

AAACTAGACT AGCTGTCTTG TAGGATGCCC CCTTCTAGCT TTGTCATCTC TGTGGTATCA 60
TTTTACTTCT TTACCTCCTG GTACATGTAA GTGAAGTAGA AGTTAGCTCT AAAGCTTGAT 120
CCAATTCAGC TTCAACTTTT TGACAAGAAT TCTTCATAAG TACTTCATGT TCCATCACAA 180
TAAATGCAAA GCATGCTCTT CCCACTTTGT TGTAACATTG TTCAGTGGGT TGGGGGTGGG 240
GCAGCCAGAT TCTTCCATCA TCAGGTCCCT TGTCAGAATT TGAACTAACA GATTTATCCA 300
TTGATGGTCA CAGCCTGTGT ATGTATGTAT GTATGTATGT ATGTATGTAT TTATTTATTT 360
ATTTATTTTT TGAGACGGGG TCTTGCTCTG TCGCCCAGGC TGGGGTGCAG TGGCACGATC 420
TCGGCTCGCT GCAAGCTCCG CCTTCTGGGT TCATGCCATT CTCCTGCCTC AGCCTCCCGA 480
GTAGCTGGGT CTACAGGCGC CCGCCACCAT GCTAGGCTAT TTTTTTTTTT TTTTTTTTTT 540
TTAGTAGAGA CGGGGTTTCA CCGTGTTAGC CAGGATGGTC TCGATCTCTT GACCTCGTGA 600
TCCGCCCGCC TCGGCCTCCC AAAGTGCTGG GATTACAGGC TTGAGCCACC ACGCCTGGCC 660
TATTTATTTA TTTATTCAGA GTCAGAGTCT CGCTCTGTCA CCAGGCTGGA GTGCAGTGGC 720
GCGATCTCGG CTCATTGCAA CCTCCACCTC CCAGGTTCAA GCGAGTCTCC TGCCTCAGCC 780
TCCCGAGTAG CTGGGATTAC AGGTGCATGT CACCATGCCT GGCTAAATTT TGTATGTTTT 840
AGTAGAGACA GAGTTTCAGT ATGTTGGCCA GGATGGTCTT GATCTCTTGG CCTCGTGATC 900
CGCCCGTCTC AGCCTCCCAA AGTGCTGGGA TTACAGGTGT GAGCCACTGT GCCTGGCCTC 960
TAAGTATTTA TTTTAAAATT AATTCATTCC ACACACATTT ATTAATATTT TCCTGTAAGG 1020
AACTTTACTC ATCTTTAAAA TGGGGAATGT CATACCTGCC TAATGACATT CTTGTAAGGA 1080
TTAAATAAAA GGTATAAGGA AGATAAGCAC CCTTTTGGAG TGATCCAGCC AGGGGAAAAT 1140
TGCTGATGCA AGAGAGGAAA TGAGTTGCTA GAGTGGTGTT GTGAGTAGAG GAGGGGAGCT 1200
GAGGCCTGCC CAAGAAGGGG GCTTGGCTGT GGTAACCACA TGGCTAGGTC TGTGTGACTG 1260
GAGGAGAGGA CGGGGCAGGT GGACTGGTAG ATGTGCAGCT TGTGCCCCTG ATTCTCTAGT 1320
TTCTTCTGTG TTTTGAGATT TGATGAGAAC GATGAAATAG TTGTCTGGAA GGAGAGGAGT 1380
GTGAATAGCA TATGCATTGT ATTGGGATTG CTGGTCTTCC TGAAATTGGT GGCCATGAAT 1440
TTAAAGTGAG ACTCTTCAAG TAGGGTTGTT ATAGTACTGG TGTAAAGCAG GAAGGTGCTT 1500
TACTAGGGTT GCAGTACTAC TGGGGAAGGG CCAAGAGAGT TGAGGGTGTA AGAAATCCAA 1560
GCCAGGTAAT GTAGTTATTT TAAAGGAGAG TGGAAGGATG GTTGAGTCAA TGGATTGGAG 1620
GTCCTATAGG GTAAGAGACT TTCTGAGGAT CACAGATACT GATTGGAATG AGCTAAAAAG 1680
ATAGGTGATG GTAGTCCTGG ACTGGGATGC TGGAAATTGA GATAGTGGGT GTGCTCTCTG 1740
GTAGTGACAA AGTCTAGATC TGCGCTGTCC AAGATAAATT CGTCTCTAGC TAATTGACAT 1800
GTGGCCAGTT TGAATTTGAA CATGCTATAA ATGTAAGATA CACATCAGCT TTTGAAGACT 1860
TAAGCAAAAA CAAAGAATAT AAAACATCTT TTTGTGAGAG AGTGTCTCAG TCACCCAGGC 1920
TGGAGTGCAG TGGCGTGATG TCCTGCTTCC AGGTTCAAAC GATTCTCCTG CCTCACAGCC 1980
TCCTGAGTAA CTGAGATTAC AGGCGCATGC CACCAAACTG GCTACTTTTT TGTATTTTTT 2040
TTTTAGTAGA AACGGTTTCA CCATGTTGGC CAGGCTGGTC TTGAACTCCT GACCTCAAGT 2100
GATCTGCCTG 2110