EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS101-00943

Organism

Homo sapiens

Tissue/cell

HT29

Coordinate

chr1:28676990-28680000

Target genes

Number: 28
Name	Ensembl ID

MAP3K6	ENSG00000142733
GPR3	ENSG00000181773
WASF2	ENSG00000158195
PPP1R8	ENSG00000117751
RPA2	ENSG00000117748
SMPDL3B	ENSG00000130768
XKR8	ENSG00000158156
RP11	ENSG00000227050
EYA3	ENSG00000158161
RP5	ENSG00000228589
PTAFR	ENSG00000169403
DNAJC8	ENSG00000126698
ATPIF1	ENSG00000130770
SESN2	ENSG00000130766
MED18	ENSG00000130772
PHACTR4	ENSG00000204138
RCC1	ENSG00000180198
SNHG3	ENSG00000242125
SNORA73A	ENSG00000201808
SNORA73B	ENSG00000200087
PRDX3P2	ENSG00000231468
TRNAU1AP	ENSG00000180098
SNHG12	ENSG00000197989
RAB42	ENSG00000188060
TAF12	ENSG00000120656
GMEB1	ENSG00000162419
YTHDF2	ENSG00000198492
EPB41	ENSG00000159023

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

FOSL1	MA0477.1	chr1:28678231-28678242	CATGAGTCACT	-	6.14
LMX1B	MA0703.2	chr1:28679407-28679418	TTAATTAAAAT	-	6.62
Nr2f6(var.2)	MA0728.1	chr1:28679793-28679808	GAGGTCAGGAGTTCA	+	6.22
Nr2f6(var.2)	MA0728.1	chr1:28679314-28679329	TGAACTCCTGACCTC	-	6.22
POU4F2	MA0683.1	chr1:28679399-28679415	ATAAATATTTAATTAA	+	6.17
Zfx	MA0146.2	chr1:28679769-28679783	GAGGCCGAGGCGGG	-	6.01

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I028350

chr1

28677288

28681588

Enhancer Sequence

ACTCCTGGGC TCCAGCGATC CTCCCTCCTC AGCCTCCCCA AATTCTGGGA TTACAAGCAT 60
GAGCCACCTC ATCTGGCCAA CAGTTTCCTA ATATCACATG ATACCCAATT ATTATTCGCA 120
GTTCCATAAT TGCCTCAAAA ATGTATTTTT TTTTTCGAGA CAGAGTTTAG CTCTTATTGC 180
CCAGGCTGGA GTACAATGGG AAGATTTCGG CTCACCACAA TCTCTGCCTC CCGGGTTCAA 240
GCGATTCTCC TGCCTCAGCC TCCCAAGTAG TAGTAGCTGG GATTACAGGC ATGTGCCACC 300
ATCCCCAGCT AATGTTTTGT ATCTTTAGTA GAGATGGGGT TTCTCGATGT TGGTCAGGCT 360
GGTCTTGAAC TCCCAACCTC AGGTTATCCG CCTGCCTCAG CCTCCCACAG TGCTGGGATT 420
ACAGGCGTGA GCCACCACTG TTGGCCTAAA AATGTCTTTT TATGGTTTGT TTGAGTCAGG 480
ATCCACTCAA GGTCAACATG TTACATTTGC TTGTGATGTC TTTGCTTCCT TTTTAAAGTA 540
TAACATTTTC CTCCTCTCAA TACCAGGAAG CCCATCTTCT TTTGGAGACC CTAGATTATC 600
CTAGTGGCCT CCTGCGGGGA GGATATTGGT GTGGCGAGTG GATGGCAACG GTTGCGCTAG 660
ACCAGAAGTT GTAGTATTAC TACCTTTTTT TTTTTGAGAT GGAAGTCTTG CTCTGTTGCC 720
CAGACTAGAG TGCAGTGGCG CACTCTTGGC TCACTGCAAC CTCCACCTCC TGGGTTCAAG 780
CGATTTTCCT GCCCGAGTAG CTCAGATTAC AGGCGGCCAC CACAGCACCT GGCTAATTTT 840
TGTATTTTTA GTAGAGACGG GGTTTCACCA TCTTGGCCAG ACTGGTCTCG AACTCCTGAC 900
CTCATGATCC ACCCGCCTCC GCCTCCTAAA GTGCTGGGAT TACAGGCGTG AGCCACCGCG 960
CCCGGCCTTT TTAGTTTGTT TGAGACAGAG TCTCGCTCTG TCACCCAGGT TGGAGTGCAG 1020
TGGCATGATC TCAGCTCACT GCAACATCCA CCTCCCGGGT TCAAGCGATT CTCCTGCCTC 1080
AGCCTCCCAA GTAGGTGGGA CTACAGGCAC ATGCCACCAT GCCCAGCTAA TTTTTTGTAT 1140
TTTTAGTAGA GATGGGGTTA CACCTTGTTA GCTAGGATGG TCTCGAGCTC CTGACCTCGT 1200
GATCCACCCA CCTCCGCCTC CCAAAGTGCT GGGATTACAG GCATGAGTCA CTACACCCAG 1260
CCCCTCCCTC CTCTTGAGGA TTCCTTTTGC TTTTCTCCTG TATTGACTTT CCCATTTCCT 1320
GTTTCCAGAA TTTTATCTAA AGTTACCTGA ACTGTATCTT TGTTTGCCCT CCGGTTTTGG 1380
TAGACCATAT CTGCCAGTAG TTTCTTGTGA AATGATGCAT CAGAGGTAAA AATGTTTAGA 1440
TCTTGTATAT CTGATTATGT CTTTACCCAC ATGTTTGAAC GATGGTGTTA ATTTTTTTTT 1500
TTTTTTTTTT TTTTTTTTTT TGAGTCTCGC ACTCTAGCCC AGGCTGGAGT GCAGTGGCGC 1560
CATCTCGGCT CACTGCAAGC TCCGCCTCCC AGGTTGACGC CATTCTCCTG CCTCAGCCTC 1620
CTGAGTAGCT GGGACTACAG GCGCCGGCCA CGACGCCCGG CTAATTTTTT GTATTTTTAG 1680
TAGAGACGGG GTTTCACCGT GTTAGCCAGG ATGGTCTCAA TCTCCTGACC TTGTGATCCG 1740
CCCGCCTTGG CCTCCCAAAG TGCTGGGATT ACAGGCGTGA GCCACCGTGC CCGGCTGATG 1800
TTAATGTTTT AACAAGGTAC AGAATCCTAG GTTGGAAATC ATCACCTTTC GGAATTTTGA 1860
AGGCATTCCT CCCTTCTTTT ACTTCAAGTG TTGCCATTGA GAGGTCTAAA GCCATTCTGA 1920
TCTCTGATCT GCTATGTGGG ACTTGTATCT TTTCTGTTTG GAAACTGATA GAATCTTGTC 1980
TTTGTCTGCA GGTCCTGACA TGTCAGTGGT GAGTCATGAT ATAGGTTTAT TCTCATTCAT 2040
TGTGCTAGGC ACACAGTGGG CCCTTTCAAT CTGGAAATTT GTGGAAAATA TTTTAAATTA 2100
TTTTATGATA TCTCCTCAAC TTTTTTTTTT AGACAGTCTC TGTTGCCAGG CTGGAGTGCA 2160
GTAGTGCGAT TTTGGCTCAC TGAAACCTCT GCCTCCTGGG TTCAAGCGAT TCTCCTGCCT 2220
CAGCCTCCCG AGTAGCTGGG ATTACAGGTG ACCACCACCA TGCCCGGCTA ATTTTTGTAT 2280
TTTTTAGTGG AGACGGGGTT TCACCATGTT GACAAGGCTA GTCTTGAACT CCTGACCTCA 2340
AGTGATTAGC CTCCCTCAGC CTCCCAAAGT GCTGGGATTA CAGGCGTGAG CCACTGCGCC 2400
CGGCCATAAA TAAATATTTA ATTAAAATAA ATTAAGAAAA AGCTTTCTCT CTGCATTGTC 2460
TCAATTTCCT ACAAGTTTCT TTCTTCCTTT TTTAAATTTT GCTAAGTGTT TTATAATCAC 2520
AACAAACTAG TACAGAGAAT GCCCTGTACA AAACACAATA AAGGTTCAAA GACCGAGGTG 2580
TTCCCTTAGC AAGGCTGAAA ATTTCAGTCT CTGGTATTTG GAATTTAGGG TGCAGTCCTT 2640
GTTTTTGGAT GGATACTGGG TGTGTGGCAC AGTCCATGCT TTTAAACAGA TTTGAACAGA 2700
AGAATGGCCA TTTGGCCCAG GTAAAAGCAG ATGAAGTGGC TGGGCGTGGT AGCTCACGCC 2760
TGTCATCCCA GCACTTTGGG AGGCCGAGGC GGGCGGATCA CCAGAGGTCA GGAGTTCAAG 2820
ACCAGCCTGG CCAACATGGT GAAACTCTGT CTCTACTTAA AATACAAAAT CAGCCGGGCA 2880
TGATGGCGCA TGCCTGTAAT CCCAGCTACT CAGGAGGCTG AGGCAGGAGA ATTGCTTGAA 2940
CCCGGGAGGT GGAGGTTGCA GTGAGCCAAG ATTGCGCCAT TGCACTCCAG CTCTGGGCTA 3000
TGGAGCAAGA 3010