Tag | Content |
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EnhancerAtlas ID | HS101-00638 |
Organism | Homo sapiens |
Tissue/cell | HT29 |
Coordinate | chr1:21645480-21646900 |
Target genes | Number: 12 | Name | Ensembl ID |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
FOXP1 | MA0481.2 | chr1:21646407-21646419 | TTCTGTTTACAC | - | 6.22 | Sox3 | MA0514.1 | chr1:21646519-21646529 | AAAACAAAGG | - | 6.02 |
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| Number of super-enhancer constituents: 34 | ID | Coordinate | Tissue/cell |
SE_00105 | chr1:21640019-21654616 | Adipose_Nuclei | SE_00854 | chr1:21642962-21648227 | Adrenal_Gland | SE_01643 | chr1:21642185-21648218 | Aorta | SE_02944 | chr1:21645843-21646528 | Bladder | SE_02944 | chr1:21646569-21647990 | Bladder | SE_04518 | chr1:21643279-21645748 | Brain_Anterior_Caudate | SE_04518 | chr1:21645844-21646711 | Brain_Anterior_Caudate | SE_05944 | chr1:21639044-21646536 | Brain_Hippocampus_Middle | SE_05944 | chr1:21646700-21650133 | Brain_Hippocampus_Middle | SE_08398 | chr1:21643228-21645720 | Brain_Inferior_Temporal_Lobe | SE_26127 | chr1:21642960-21646679 | Duodenum_Smooth_Muscle | SE_26770 | chr1:21642974-21647847 | Esophagus | SE_28486 | chr1:21644573-21646764 | Fetal_Intestine | SE_29337 | chr1:21644662-21646709 | Fetal_Intestine_Large | SE_31433 | chr1:21643029-21648183 | Gastric | SE_42174 | chr1:21642958-21646742 | Lung | SE_44380 | chr1:21642937-21647054 | NHDF-Ad | SE_45045 | chr1:21643168-21646698 | NHLF | SE_46660 | chr1:21643459-21645622 | Ovary | SE_46660 | chr1:21645855-21646940 | Ovary | SE_47592 | chr1:21643574-21645731 | Pancreas | SE_47592 | chr1:21645786-21646790 | Pancreas | SE_48583 | chr1:21642944-21648219 | Right_Atrium | SE_50108 | chr1:21643010-21645670 | Sigmoid_Colon | SE_50108 | chr1:21645842-21646761 | Sigmoid_Colon | SE_52633 | chr1:21642919-21645734 | Small_Intestine | SE_52633 | chr1:21645749-21646973 | Small_Intestine | SE_53334 | chr1:21642938-21645903 | Spleen | SE_54639 | chr1:21639148-21648300 | Stomach_Smooth_Muscle | SE_56171 | chr1:21645755-21646598 | u87 | SE_65263 | chr1:21643359-21649820 | Pancreatic_islets | SE_67931 | chr1:21645755-21646598 | u87 | SE_68932 | chr1:21643728-21645709 | H9 | SE_68932 | chr1:21645866-21648182 | H9 |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 3 | Chromosome | Start | End |
chr1 | 21645729 | 21645787 | chr1 | 21645949 | 21646849 | chr1 | 21645929 | 21646735 |
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| Number: 1 | ID | Chromosome | Start | End |
GH01I021312 | chr1 | 21638973 | 21657659 |
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Enhancer Sequence | GTTTTCAGTG GAGCTGGGTC TGTACAATCT CCCGGGCTCC GTTTTCTCAT CAGCTAAGTC 60 AAAATAATAA AGTGAGGCCA GGCACGGTGG CTCAAGCTCG TAATCCAAGC ACTTTGGGAA 120 GCCAAGGTGG GTGGATTGCC TGAGCTTAGG AGTTCGAGAC CAGCTTGGGC AACATGGTGA 180 AACCCCGTCT CCACTAAAAT ACAAAAAAGT AGCCAGGCGT GGTGGTGTGC GTCTATAATC 240 CCAGCTACTT GGGAGGCTGA GGTGGGACAA TCGCTTGAAC CCGGGAAGTG GAGGTTGCAG 300 TGAGCCGAGA TCGCATCACT GCTTTCCAGC CTGGGAGACA GAGCGAGACT CCGTCTCAAA 360 ATAATAATAA TCATAATCAT AATCATAATC ATAATCATAA AGTGGACTAC GCAGGGCTTT 420 TCTAGAGACA TGATAAGACC TCGTGTCTAA ATGGCCTGGT ACATACTAGG GCCTCCATAA 480 ATGCCGGCTC CATGCTGCCC CCACCTCTGT CCACCAGGGC ACCCCCGGCA CCAAGGGCCA 540 GACTCCCTCT GCTGCCCCCA ATCTGCTTCT CAGACTTTCT GCTCCTGGCC TTCCTGGGAG 600 CCCTCCAAGC CAGCAGCTGT GCCCTCCCCT CTGTGAACTG GGCAGGAAAG CCAGGCTCCA 660 TCCCTGTCCA ACTCTCCTCA GCCTCTCCTG AGACCTGGCT CCTCATTCTC GCCACTCCCT 720 ACCAGGCACC GGGAGGCACG GCTCACTGTT CCCTAGTTTG TCTTGGTCCC CCAGAGGGCC 780 AACAAGCAGT CTGGGTGTTT ACATTAGTTC AGCTGAGACA GGCTGAACAA ACACACGCGG 840 TCCCATGGCT TCTAGTGCCA GCCCCCACAC ACCACTCGCC ACCCAGGCTG TCTTGAGTCC 900 ACAGGTGTCC CCACCCCACT CCAGATCTTC TGTTTACACT CGGCAGCAGC GTCCCATCTT 960 TTGACTTCCC TGGGCCACAA TGTAAGAAAT ATTGTCTTGG GTCACACATA AAATACACCA 1020 ACGATAGCCG ATCAGCTAAA AAACAAAGGT GCATGCATAA ATCTCAGAAT GTTTTAAGAA 1080 AGTTTATGAA TCTGTGGTGA GCCGCATTCA AAGCCATCCC AGGTCACATG CGGCCCACGG 1140 GCCGCAGGTT GGACAAGCTC ATTCACAGAT TCTCCCCATG GATTCTGTTT GAGGTTTGCT 1200 GCGTCCAGCT GATACCTGGT GAGACACTAA CCCCGCCCAC GACTATCTCC AGGCTCCAGC 1260 CGTCAACAGC TGTATGGGCT CAAACAGGTC ACCGGACTTC TCATTTATAA AATGGGGATG 1320 GTGACAGGGC CAACCCCACA GAGGACTGCT ACGATCAAAT GGGATAATGA GAGGTAGGCG 1380 CTAAGCACGT TGCCTGCAGG GCTCATGGAA GGTGCTGGAG 1420
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