EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS101-00634

Organism

Homo sapiens

Tissue/cell

HT29

Coordinate

chr1:21586060-21586760

Target genes

Number: 12
Name	Ensembl ID

EIF4G3	ENSG00000075151
RP3	ENSG00000236936
RP5	ENSG00000231105
ECE1	ENSG00000117298
PPP1R11P1	ENSG00000236216
HS6ST1P1	ENSG00000187952
NBPF3	ENSG00000142794
RP11	ENSG00000233431
RAP1GAP	ENSG00000076864
USP48	ENSG00000090686
CDC42	ENSG00000230068
WNT4	ENSG00000162552

dbSUPER

Number of super-enhancer constituents: 9
ID	Coordinate	Tissue/cell

SE_00854	chr1:21585915-21590867	Adrenal_Gland
SE_01887	chr1:21585859-21590888	Aorta
SE_05944	chr1:21586051-21591007	Brain_Hippocampus_Middle
SE_35152	chr1:21585886-21590992	HeLa
SE_38063	chr1:21586453-21590827	HUVEC
SE_42174	chr1:21585877-21590904	Lung
SE_45257	chr1:21586444-21590604	NHLF
SE_48583	chr1:21586247-21589944	Right_Atrium
SE_65263	chr1:21585851-21593514	Pancreatic_islets

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I021259

chr1

21586025

21590811

Enhancer Sequence

TTTGGCACAT GGGACCTGTC CAGAGAGGAG GGGACTAGCA TAGTCCCCAG CGCATGCAGC 60
CACCAACCCT GCTGCAATGC TTTCCTGGAG CCAAGCTAAG AGGCAGGGCT GTCCAGGGAA 120
CACGAGGCAG GCAGAAAACA TCCACAGACA CCTACTGTCT GCACCAGGAA GCCTCAGAGT 180
CTGGGAAGTG CCCAAGAAAG CAAGAAAGAT GTCTTCCCCT GCTCAGGAGT AAGCAGGTAT 240
AGGAGAGTGG CCTGGGTCCC TGCTCACGGG GAGGGCTCTG GTTCTGGGCC AAGACTCTCT 300
GTGGGTCTTT CTGGAACAGG CACACACCCC TCCACACACA CAAACATAAC CCCTGAGGAA 360
AAAACAGCAG CAACGTGGAG GAATATTTTC CCTCTAAACA TGGCCCCCAT CCCACACACA 420
GATGCACAGA GAGACACACA GACAGATGAC AGACATCTAC AACAGATGCT GACACACACT 480
CTCACACAAA CACATGCACA GACAACCCAC CCACGCAGCT ACGCAATGTG CTCACACTCA 540
CATGTGCTCT CGCACACTCG CTCTCTCTCT TTCTGTCTTT CTCTTGGTGC TACCGGCTGG 600
ACGTATGAGG TGGGCCAGTG GTACCAGAAG GCTGGAGTGG AAGCCAGGGG GCGGGCAGGT 660
GGCATGGGCC GGGGCTTGGG GAGGGAGAGC CCGAGGCACT 700