EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS101-00463

Organism

Homo sapiens

Tissue/cell

HT29

Coordinate

chr1:16933810-16935000

Target genes

Number: 21
Name	Ensembl ID

PLEKHM2	ENSG00000116786
RP11	ENSG00000237938
FBLIM1	ENSG00000162458
ZBTB17	ENSG00000116809
EPHA2	ENSG00000142627
ARHGEF19	ENSG00000142632
ANO7L1	ENSG00000237276
RSG1	ENSG00000132881
FBXO42	ENSG00000037637
C1orf144	ENSG00000055070
NECAP2	ENSG00000157191
RP4	ENSG00000226029
RP5	ENSG00000233421
NBPF1	ENSG00000219481
CROCCP2	ENSG00000215908
MST1P2	ENSG00000186301
EIF1AP1	ENSG00000236698
ESPNP	ENSG00000116219
RP1	ENSG00000239644
MST1P9	ENSG00000186715
ATP13A2	ENSG00000159363

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF13	MA0657.1	chr1:16934217-16934235	AGGCCATGCCCCTTTCTT	+	6.11
NFAT5	MA0606.1	chr1:16933829-16933839	ATTTTCCATT	+	6.02
NFATC1	MA0624.1	chr1:16933829-16933839	ATTTTCCATT	+	6.02
NFATC3	MA0625.1	chr1:16933829-16933839	ATTTTCCATT	+	6.02

dbSUPER

Number of super-enhancer constituents: 3
ID	Coordinate	Tissue/cell

SE_41960	chr1:16933801-16934426	LNCaP
SE_41960	chr1:16934453-16934843	LNCaP
SE_41960	chr1:16934874-16935592	LNCaP

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I016607

chr1

16933830

16936084

Enhancer Sequence

GGAAACTTAC ACCACCAATA TTTTCCATTA ACAGGAACAC GCTAAGTAGT TATTAGAGAA 60
AGACACGCTA CTGTAAAACA ATATACTGTT TCCATGGGGT ACAACAACCC CTTCCTCCTC 120
CTCTGAAACA CATTCTATCT CTGGCTCACT GTTGCCAGAG ACACTGAGTC TTGTCTTTGG 180
ATACGTTCTG GTGCCCACAA GAATGAGATG AGACAGTGGA TCCCAGAACA CCAGGCCACG 240
AACTTCCCTG TTGCTCCTTG TCCACTCCAG AAGCTACCCA GCTGCAGTTG GGGACCTCAG 300
CCCCTGGGTC TGATGTCATC CATTTGCCTT TCTCAATGGA CTTCTCTCCT TGCACTGGCT 360
CCTACTCCCC CAGGACCTGT GGGTGACCAC ATGAGAAGAA CACAAACAGG CCATGCCCCT 420
TTCTTTCTCC CCCTCTCAAT GCCTGCAGTA GTGGGTTCCA TGGGGTAGTG ACCTGAGATT 480
TACTCATTGT GGGGCCTCTA GCCCAGAGCA GGGCCTACTA CCTCACAGTC ACCCCATGAA 540
TGCTCAGTGA AAGAAGACGT CCACCACAAG GTCCTGGGGA ACCAAGAATT CCACTGTGGC 600
CCATAAATTC TAAGTCTACA GGATTCTGGA ATGGGAGATG GGAAAGGCCT TCAAAAGTGG 660
CCACTTTTAA CCCATTATAC TGGCAACTGA GCCATGTTTC CCCATCCTGG ACACATCCAG 720
AGGGCACTGC CTAAAACCAG ACACATCTCC CCACCCAGGA CAGTGTAGGA GCCTTAGCCT 780
GGGGGATGCA GGTGGACAGG GAGGGGGTGA GCCACCAAAG CTGAAGAGCA GAAAGCAGGT 840
GAAAGGGGAC AGCAGGGTGG AAACAGAGAG AAATGGGGGC AGAGAATGGG GGGTGAGAGG 900
GGAAGAGTGA GGAGAGGGAT GCAGATCTAG CTAGTAAGGA AAAGTCCTGG AGAGAACACT 960
GTCCTCTCCT GAAGTAAAAT CACTTCTACC TGACCACGGC ACTGCAGCTC ATGGGCAGCA 1020
CATGCTGTGG ATATTTGTTC ATTCATTTAA CAAATATTTA TTTAATATCT GTTGCATGCC 1080
AAGCAAGGCC CTGCAATGTT TAGGGACCTT GACATCTTCC CTTCACATCT GAGTCATAAT 1140
ACAAAGAGGA CTCTCTGACC CCACTGAGCT GGCAATGCCT CGGGATTTTT 1190