EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS101-00234

Organism

Homo sapiens

Tissue/cell

HT29

Coordinate

chr1:8306870-8309000

Target genes

Number: 8
Name	Ensembl ID

VAMP3	ENSG00000049245
PER3	ENSG00000049246
RP3	ENSG00000236266
PARK7	ENSG00000116288
ERRFI1	ENSG00000116285
CTA	ENSG00000232848
RP4	ENSG00000234619
ENO1	ENSG00000074800

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

CDX2	MA0465.1	chr1:8307961-8307972	TTTTATGGCCT	-	6.02
IRF1	MA0050.2	chr1:8306999-8307020	TTTTGCTTTCTTTTTTTTTTT	+	6.99
Nr2f6(var.2)	MA0728.1	chr1:8308870-8308885	TGAACTCCTGACCTC	-	6.22
Zfx	MA0146.2	chr1:8307574-8307588	GAGGCCGAGGCGGG	-	6.01

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I008246

chr1

8306898

8308634

Enhancer Sequence

AATGTTCACT CCATGAGCCA ATGTCCTAGC TAGAATGAAT CTCCAAGCTG CTTAGAAGAG 60
TTAGGGACAG ACTGTCAGAA AACTGGGTGT GGGTAATTAA CTTCTGCTAC ACCCAAGACA 120
ATCTTTTCTT TTTGCTTTCT TTTTTTTTTT TTTGAGACAG AGAGTCACTC TGTTGCCCAG 180
GCTGGAGTAC AGGGGCACCA TCTCTCGGCT CACAGCAACC TCCACCTCCT GGGTTCCAGC 240
AATTCTCCTG CCTCAGCCTC CTGAGTAGCT GGGATTACAG GTGCACTCCA ACACGCCTGG 300
CTAATTTTTT TTTTTTTTTT TTTTTTTGGA TTTTTAGTAG AGACGGGGGT TTCACCAGGT 360
TGGTCAGGCT GGTCTCGAAC TCCTGACCTC AGGAGATCCA CCTGCTCCCG CCTCCCAAAG 420
TGCTGGGATT ACAGGCGTAA GCCATCGCAC CTGGCCAATC TTCAACTGCA GAGATTTGAA 480
TATGGGAAAG AGAAAAAGGA CTCCAGTTTC CCCAGGGCAG TTTCATTAAG AGACTGTGAG 540
CGGAGAGCTC TACCAATGAA AGTGCAGGCT GGCGGCTCTC TACAGCGAAG GCAGAGGAGG 600
TGAAATTCTG ACTCTGGAAA CTTGTCATTG CCACCAAATA AATAAATAAA AACGTGGGTA 660
GTGGCCAAGC GCAGTGGCTC ACGCCTGTGA TCCCAGCACT TTGGGAGGCC GAGGCGGGCA 720
GATCACCTGA AGTCGGGAGT TCGAGATCAG CCTGACCAAC ATGGAGAAAC CCCATCTCTA 780
CTAAAAATAC AGAAATTAGC TAGGTGTGGT GGCGCATGCC CGTAATCCCA GCTACTCAGG 840
AGACTGAGGC AGGAGAATCG CTTGAATCCT GGGTGGCGGA GATTGCTGTG AGCCGAGATC 900
GTGCCATTGC ACTCCAGCCT GGACGACAGA GCTAGACTCT GTCTCAAAGA AAAAGAAAAA 960
AAAAATGGGA TGATTAGATT TTGTGTGTGT GATTTAGTTC TAGTCTAACA GGAGAAAACA 1020
GTAGCTTTGG TTGTTTCACA ATCAAGTGAG TTTGTTTCCA ACTGTAAAAG TGATTTGGTG 1080
CCGGATATCA ATTTTATGGC CTTTCCCTGG GTGTGATAAC TGGAAAATGC CCCAGGAAAA 1140
CCTGTCGGAA ATCTAGAATT GCTCCATATA GATCCTCCTG CCTCTAGGAA TGAGAGTTGA 1200
TGGAGGCTTA GCAAATCATT ACATTATTCT GTACTAAAGC CTGATAGATC CATAATAAAA 1260
GTTAATGATT AGGTACATAC TTTCCGACAT TTCAAAAGAG TCTAGACTGA AAATACTGGA 1320
AAAAAACCTT TGTATGTTTC CTCTTTAGTA TGCCACGGAA TAAGATTTTA AAGTGGCTGG 1380
ACGCGGTGGT TCACGCCTGT AACCCCAGCA CATTAGGAGG CTGGTGGATT GTTTGAGCCC 1440
AGAAGTTCAA GCAAGGCCAG CCTGGACAAT GTGCAAAACT CCGTCTCTAC AAAAATTACA 1500
AAAACTAGCT GGGCATATTG TCATGCGTCT GTAGTCCCAG CTACTCGGCA GGCTGAGTTG 1560
GGAGGATTGC TTGAGTCTGG GGAAGCTGAG CCTGCAGTGA GCTGTGATTG TGCCACTGCA 1620
CTTGTGCCTG GGTGAAAGAG TGAGGCCCTG TCTCAAAAGA CAAAAAAAAA AAAAAAATTT 1680
AAAGCTACTT CAATACCAGC CTAAAGCCAT TAGTGGTTTT TTTTTTTTTT TCATTTGTCA 1740
CCCAAACAGT CCCACTTAAG AGAGTTCTTT TTTAATTCAT TTTTATTTTT TTATTTTTTT 1800
CAGACGGAGT CTTGCTGTGT CGCCCAGGCG GGAGCGCAAT GGTGTGATCT CAGCTCACTG 1860
CAACCTCTGC CTCCCAGGTT CAAGCGATTC TTCTGCCTCA GCCTCCTGAG TAGCTGGGAT 1920
TACAGGCATG TGCCACCATG CCCGGGTAAT TTTGTATTTT TAGTAGAGGT GAGGTTTCAC 1980
CATGTTGGTC AGGCTGGTCT TGAACTCCTG ACCTCAGGTG GTCTGTCCGC CTCAGCCTCC 2040
CAAAGTGCTG GGATTATAGG CATGAGCCAC TGCACCCAGC TTGTCATGCT CTTTTAACAG 2100
GGACCCACAG GAGAAGATAC ATTTACCATC 2130