EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS101-00026

Organism

Homo sapiens

Tissue/cell

HT29

Coordinate

chr1:976260-976370

Target genes

Number: 55
Name	Ensembl ID

AL669831.1	ENSG00000197049
NOC2L	ENSG00000188976
MTND1P23	ENSG00000225972
MTND2P28	ENSG00000225630
RP5	ENSG00000237973
SAMD11	ENSG00000187634
RP11	ENSG00000234711
PLEKHN1	ENSG00000187583
C1orf170	ENSG00000187642
HES4	ENSG00000188290
ISG15	ENSG00000187608
AGRN	ENSG00000188157
KLHL17	ENSG00000187961
FAM87B	ENSG00000177757
LINC00115	ENSG00000225880
FAM41C	ENSG00000230368
RNF223	ENSG00000237330
C1orf159	ENSG00000131591
TTLL10	ENSG00000162571
TNFRSF18	ENSG00000186891
SDF4	ENSG00000078808
B3GALT6	ENSG00000176022
FAM132A	ENSG00000184163
UBE2J2	ENSG00000160087
SCNN1D	ENSG00000162572
PUSL1	ENSG00000169972
ACAP3	ENSG00000131584
CPSF3L	ENSG00000127054
GLTPD1	ENSG00000224051
TAS1R3	ENSG00000169962
DVL1	ENSG00000107404
MXRA8	ENSG00000162576
AURKAIP1	ENSG00000175756
CCNL2	ENSG00000221978
RP4	ENSG00000224870
MRPL20	ENSG00000242485
ANKRD65	ENSG00000235098
TMEM88B	ENSG00000205116
VWA1	ENSG00000179403
ATAD3C	ENSG00000215915
ATAD3B	ENSG00000160072
ATAD3A	ENSG00000197785
TMEM240	ENSG00000205090
AL645728.2	ENSG00000215791
SSU72	ENSG00000160075
AL645728.1	ENSG00000215014
MIB2	ENSG00000197530
CDK11B	ENSG00000248333
SLC35E2B	ENSG00000189339
CDK11A	ENSG00000008128
RP1	ENSG00000227775
SLC35E2	ENSG00000215790
NADK	ENSG00000008130
GNB1	ENSG00000078369
CALML6	ENSG00000169885

TF binding sites/motifs

Number: 5

TF

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF5	MA0599.1	chr1:976266-976276	GGGGCGGGGC	-	6.02
KLF5	MA0599.1	chr1:976294-976304	GGGGCGGGGC	-	6.02
KLF5	MA0599.1	chr1:976357-976367	GGGGCGGGGC	-	6.02
SP1	MA0079.4	chr1:976292-976307	GAGGGGCGGGGCCTA	-	6.32
SP4	MA0685.1	chr1:976290-976307	GGGAGGGGCGGGGCCTA	-	6.29

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

SE_24817

chr1:975219-976315

Colon_Crypt_3

Number: 1
ID	Chromosome	Start	End

GH01I001038

chr1

974052

977746

Enhancer Sequence

GTGAGCGGGG CGGGGCCGGT GCCTGGGGCG GGGAGGGGCG GGGCCTATGA GATGGAGCGA 60
GGCTGGGAGG GGCTTCGGGG CCAGTGGGGC GGGGGCAGGG GCGGGGCCCG 110