EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS099-00726

Organism

Homo sapiens

Tissue/cell

HSMMtube

Coordinate

chr1:42342530-42343110

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

IRF1	MA0050.2	chr1:42342650-42342671	CCTGAGTTTCAGTTTCCTTAC	+	6.27
IRF9	MA0653.1	chr1:42342654-42342669	AGTTTCAGTTTCCTT	-	6.9

dbSUPER

Number of super-enhancer constituents: 6
ID	Coordinate	Tissue/cell

SE_25331	chr1:42325035-42352494	DND41
SE_31241	chr1:42342412-42343256	Fetal_Thymus
SE_39407	chr1:42341350-42343524	Jurkat
SE_44017	chr1:42342111-42343664	MM1S
SE_49913	chr1:42336834-42349775	RPMI-8402
SE_66323	chr1:42341350-42343524	Jurkat

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I041876

chr1

42342241

42343266

Enhancer Sequence

GAGTATCATT ACAGAAATTA TCTGCTGTGC AGCCTGGAAA CAGCAAAAGG AAAACTCAGC 60
ACGTTCTACA GACGTGGGTT CAAAGCCCTG CTCTGTCCTC CCTCCAAGCC CTAAACCCCT 120
CCTGAGTTTC AGTTTCCTTA CTGAAGAAGT GGGAAGGCCA TGTGCATTGA GAGGTTACTG 180
TGGTTTTGAG TCCAGTGAAT ACACACACTG CTAAATCCTA AAACTCTTCT TTCTTTTTTG 240
GTTAATAATA TTAAACTCAT CCAGGAGAAT ACCTTAATTT AAGACTCCAG GCAGAATTCT 300
CCTTTCCCCA AGCTCTGCCA ACACCCAAAC CCCTCCCCAG AAGACAGCCT GGTTCACACA 360
ACAGAGGAAC AGACCCCTCA CGACTCTGCA GGGGGAATTC CTTTCTGGGA GAGAACACAT 420
GTCCAATAGG GCCAGTCCCC ACTCAGGCTG CTGCTGTCAC TCAGCCAGAA GGCAGGACAG 480
GCTTTTGAAG CTGTGATATT TCTGAGTTTG GTTTTGGACA AAAACACCAT TCTTCCTCAT 540
AGCCTTTCAC ACCCTGATTC AAGCAATTTT AACTGAATTC 580